KEGG   Saccharomycodes ludwigii: SCDLUD_004121
Entry
SCDLUD_004121     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03030  DNA replication
slud03410  Base excision repair
slud03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SCDLUD_004121
   03410 Base excision repair
    SCDLUD_004121
   03450 Non-homologous end-joining
    SCDLUD_004121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slud03032]
    SCDLUD_004121
   03400 DNA repair and recombination proteins [BR:slud03400]
    SCDLUD_004121
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:slud04147]
    SCDLUD_004121
DNA replication proteins [BR:slud03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SCDLUD_004121
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SCDLUD_004121
DNA repair and recombination proteins [BR:slud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SCDLUD_004121
Exosome [BR:slud04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   SCDLUD_004121
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc DUF3937 Cadherin_2 CDKN3 HHH_5 DprA_N zf-ZTF-17_C2H2_2
Other DBs
NCBI-GeneID: 70109438
NCBI-ProteinID: XP_045933761
LinkDB
Position
V:<772371..>773552
AA seq 393 aa
MGIKGLNAIISDKVPTAIRKADIKTFFGRKVAIDASMSLYQFLIAVRQQDGQQLTNEMGE
TTSHLMGIFYRTLRMIDNGIKPCYVFDGKPPDLKGGELAKRLEKRNDAITKAEELKLKKG
EAEGEIEEDLRQQISKFERRTVKVTREQNEEAKHLLDLMGIPYVNAPCEAEAQCAELAKC
GKVYAAASEDMDTLCYKTPFLLRHLTFSEAKKEPIHEINTDLVLKGLDMTLEQFVDLCIL
LGCDYCDTIRGIGPVTAFKLIKEHGSIENVVEYINTSVNTKEKKKWIIPEIWPYQEARRL
FLAPDVVDGNDITLKWNPPKEAELIKFLCEEKGFAEDRVRSGIKRLQKGLKTGVQGRLDG
FFKVVAKPQQQSKDNSTAARKNTSKGKVTKKRK
NT seq 1182 nt   +upstreamnt  +downstreamnt
atgggtattaagggtttgaatgcaattatatcagataaggtaccaacagctatacgtaaa
gctgatatcaaaacattttttggtagaaaagtagcaattgatgcatccatgtcattatat
caattcttaattgctgttagacagcaggatggtcaacaattaactaatgaaatgggtgaa
accacttctcacttaatgggtatcttttatcgtactttgcgtatgattgacaatggtatc
aaaccatgttatgtatttgatggtaaaccacctgatttaaagggtggtgaattggctaaa
agattagaaaaaagaaatgatgcaattaccaaagctgaagaactaaaactcaaaaaaggt
gaggcagagggagaaatagaagaagatttacgacaacaaatatccaaatttgaaagaaga
actgttaaagtaactcgtgagcagaatgaagaagctaaacacttgctggatttaatgggc
attccctacgttaatgcaccctgtgaagctgaagcacagtgtgccgagctagccaagtgc
ggtaaagtttatgctgctgcgagtgaggatatggacaccttatgctataaaacacctttc
ttattaaggcatttaactttcagtgaggccaaaaaagaacctattcacgagattaataca
gatttagttttaaaagggctagatatgacgttagaacaatttgtcgatttatgtattctg
ctgggctgcgattattgtgatactatcagaggcattggtcctgttacagcctttaaattg
atcaaagaacatggttcgatcgaaaatgttgttgaatatatcaataccagtgtcaatact
aaagaaaaaaaaaaatggatcattcctgaaatttggccatatcaagaagctagaagatta
tttttggcaccagatgtcgttgatggtaacgacattacattaaaatggaacccaccaaag
gaagctgagttgattaagtttttatgtgaagaaaagggttttgctgaagatagagtacgt
tcaggtattaagcgattacaaaaaggactaaaaactggtgtgcaaggcaggcttgatgga
tttttcaaagttgttgctaaacctcaacagcaaagtaaggataattctacagcagctaga
aaaaatacaagtaaaggtaaagtgaccaaaaagaggaaataa

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