Saccharomycodes ludwigii: SCDLUD_004122
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Entry
SCDLUD_004122 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCDLUD_004122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_004122
Enzymes [BR:
slud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
SCDLUD_004122
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SCDLUD_004122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
70109439
NCBI-ProteinID:
XP_045933762
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All DBs
Position
V:774074..775204
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AA seq
376 aa
AA seq
DB search
MPKASSTKTAIKFTRSTTSKFKFGAHVSASGGISKSVTNAFNIGCNSFAMFLKSPRKWSA
PPFTTEEINKFRQNCIELKYDPLTDILPHGQYMINLANPDKEKAEKSFESFLDELRRCEE
LGIGHYNFHPGSSLSSGDHEKQLKQLANYINIAHEKTSFVKTVIENMAGTGNLVGSDLND
IRKVIELVKNKDRVGVCIDTCHTFAAGYDIGTEQSFYNFMNEFNQIIGQEYLMGIHLNDS
KAPLGGNRDLHEKIGQGYIGLEVFKAVAHCDLLCGIPIILETPQEKDEGYGEEIKLLEWL
EEIGDKPEEGMEEENEKDNKLLQDKIVYLQKLGENSRKKQMELFEKKKNGKDNKAKKKRS
NNDDDIITKLAKKVKR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagcctcctccactaaaactgctatcaaatttaccagatcaacgacatctaag
tttaaatttggagcacatgttagcgcaagcgggggcatttcaaaaagtgttaccaatgct
ttcaatataggctgtaattcgtttgctatgtttttgaaatcgcctaggaaatggtcggct
ccaccattcacaactgaagaaattaataaatttagacaaaattgtattgaattgaagtat
gaccctttaaccgatattttacctcacggtcaatatatgatcaacttagccaacccagat
aaggaaaaagctgaaaaaagttttgaaagttttcttgatgaattaagaagatgtgaagaa
ttgggtataggtcattataattttcatcctgggtcctcattatccagtggtgatcacgaa
aaacaattaaaacaactggcaaactatattaacatagctcatgagaaaacttcgtttgtc
aaaaccgttattgaaaatatggctggaaccgggaatctagttggcagtgacctaaatgac
atccgtaaagttattgaactggttaaaaataaagatagagtaggggtttgcattgataca
tgccacacttttgcagctggctacgatattggcactgaacaatctttctataattttatg
aatgaattcaaccaaataattggtcaggaatacctaatggggattcacttaaacgattct
aaggctcctcttggtggaaatagagatttgcatgaaaaaataggtcaaggctatattgga
ttagaagttttcaaggcagttgctcattgtgatttattatgtggaataccaataattttg
gaaactccacaagagaaagacgaaggttatggtgaagaaattaaattgctagaatggtta
gaagaaattggggataaaccggaggaaggaatggaggaggaaaatgaaaaggataataaa
ctattgcaagataaaattgtttatttacaaaaattgggtgaaaactccagaaaaaaacaa
atggaattatttgaaaagaagaagaatggtaaagataacaaggccaaaaagaagcgcagt
aataatgatgatgacattataactaaattagcaaaaaaggtgaagagatag
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