Saccharomycodes ludwigii: SCDLUD_004266 Help Entry SCDLUD_004266     CDS       T08289                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism slud  Saccharomycodes ludwigii Pathway slud03018   RNA degradation Brite KEGG Orthology (KO) [BR:slud00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     SCDLUD_004266  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:slud03019]     SCDLUD_004266 Enzymes [BR:slud01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      SCDLUD_004266 Messenger RNA biogenesis [BR:slud03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      SCDLUD_004266   mRNA degradation factors    3'-5' decay     Ski complex      SCDLUD_004266 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD Ski2_beta-barrel Helicase_C ResIII DEXQc_Suv3 MTR4-like_stalk Motif Other DBs NCBI-GeneID:  70109583 NCBI-ProteinID:  XP_045933883 LinkDB All DBs Position V:complement(<1040877..>1044818) Genome browser AA seq 1313 aa AA seqDB search MSLEELYASLQNVPDDSKEDPQVFDDTITKFDFKKYDNDKELVAKKLYKGFLNVSNELSW DLLDVFQTIPKMNYLNINKSKNEARNKDDIYDYTDFFPELDMASRTNYHFKRTGIEGRIF DYEEKVNLDDVKDANASNSLSLTRKIDNMQHTIQGGVSNLPFTPGGIILNTNSNIGTTVV DTNTFIATPTKTASSLLHKDDYGLFDIPPTLERGIVPQFIVNNELEDLDSIVEIKKADSM TDEQLGIAPSVQTTAKTNEKNWLEQSLVSTPKNDNSFDEEVDKLIPKGIDFGRTTIIKNF SEENREWAHVVDVTHKITNFDELVPNPARTWPFELDTFQKEAVYHLEQGDSVFVAAHTSA GKTVVAEYAIALSKRNMTKTIYTSPIKALSNQKYRDFKEEFDELDVGLITGDVQINPDGN CLIMTTEILRSMLYRGADVIRDVEFVIFDEVHYVNDQDRGVVWEEVIIMLPQHIKFILLS ATVPNTYEFASWIGRTKQKNIYVISTPKRPVPLEINLWTKDELIPVITPDKNFLTDNFKK HKELLSGEKNDFRDKNGANHGTLKNNKSGRGGGRGGARGGARGGARGGARGGNNNTGNNK GGRLVVGHRGAGAIGSNKRQFYQNSGANSKTWPHLVNFLERKSLLPAVIFVFSKKRCEEY ADSLSGVNFCGNKERSHIHMTMERAVVRLKKEDRELPQILKMRTLLERGIAVHHGGLLPI VKELVEILFAEGHVKVLFATETFAMGLNLPTRTVVFSEISKHDGTKVRPLNPGEFTQMAG RAGRRGLDTTGTVIIMTYKTPLEPVTFKEVTLGSPIRLQSQFRLTYNMILKLLKIEALRV EEMIKYSFSEDNNQALLPQQQKDIALLTERAESIEFYDNCEYCSHDIDKALSLFLDYKEN WKEFVSKISAFAVFAAYFSTGRLVIYRLETPDEFVYKLGFIFRSFSKSGNCIVLCFTEEN QLKFRGKVYIPYVINKKFIGNNFGTFVKLVNPILEEIPITNIELVSSYKSKTRLVSYLAN EKEAIDLFEEEIGSIVKDLSYFSDFEPKKILPLEVGNLLKERKSLFKAIVSLQGPMTCPD FVQHLYPKYFKSTIEDQISALKHLSSDQNLKLLPDYEQRLKVLRDGEFIDKNANVLLKGR VACEIDIGYELVITELILDNFLGDFQPEEIVALLSVFVYDGTNKKNVEEPIPANERLTLG KDKIEGIYKKMLKLYEKHQVPITSEEEDFLERRRFMLLNVVYEWARGVAFKDIMEITDES EGTIVRIINRLDEICREVKTAAIIIGNSDLHSKMSTAQELIKRDIVFAASLYL NT seq 3942 nt NT seq  +upstreamnt  +downstreamnt atgtcattagaagagttatatgcttccttgcaaaatgtgcctgacgactccaaagaagat cctcaagtatttgatgatacaatcacaaaatttgatttcaaaaaatacgataatgataaa gagctggtggcaaaaaaactttacaaaggttttttaaatgttagcaatgaattgagttgg gatcttttggatgttttccaaaccatacccaaaatgaattatttgaatatcaataaatct aaaaatgaggctaggaataaagatgatatttatgattataccgactttttccccgagttg gacatggcctcaaggactaactatcactttaaaagaacaggcattgaggggagaattttc gattatgaggaaaaagttaatcttgatgatgttaaggatgctaatgcatcaaactcctta tcattaaccagaaaaattgataatatgcaacatactattcaaggtggggtttctaattta ccatttacacctggtgggattattttaaacactaatagtaatattggtaccacagttgtc gacacaaatacttttatcgcaacaccaaccaaaacagcgagctcattattgcataaagat gactatggtttatttgatattccaccaacattagaaaggggtattgtgccacagtttatt gtgaacaatgaattggaagacctagattccatagttgaaataaagaaagccgattcaatg acagatgaacagttggggattgctccaagcgtacaaaccacggccaaaacaaatgaaaaa aactggctggaacaatctttggtttctacccccaaaaatgataattcttttgacgaggaa gtggataagttgattccaaaggggattgattttggccgaacaaccattatcaaaaatttt tccgaagaaaacagggagtgggctcatgttgttgatgtcacacataagattactaatttt gatgaactagttccaaatcctgctagaacctggccctttgaactagatactttccaaaaa gaggctgtgtatcatttagagcagggcgattccgtgtttgttgctgctcatacctcagct ggtaagaccgtcgttgccgaatatgcaattgccttatcaaaaaggaatatgactaaaact atttatacctcacctattaaagctttgtcaaaccaaaaatacagggatttcaaagaggaa tttgatgaactagatgtcggtttaattacgggtgatgttcagatcaaccctgatggaaat tgtttaattatgacgactgaaattttgaggtctatgctttataggggagctgatgtcatc agagatgtggaatttgttatttttgacgaggttcattatgtcaatgatcaagaccgtggt gttgtttgggaagaagtcattattatgctaccccaacacattaaatttatcttactatcg gctactgttccaaatacgtatgaatttgctagttggattggtagaacaaaacaaaaaaat atttacgtaatttccacccctaaaaggcctgttccattggaaattaatttgtggacaaaa gatgagttaataccggttatcacaccagataagaattttttaactgataacttcaagaaa cataaagaattgttaagcggcgaaaaaaacgattttagagacaaaaatggtgctaatcat ggaactctgaaaaacaataagagtgggagaggaggtggtcgcggaggagctcgtggagga gctcgtggcggagctcgtggcggagctcgtggcggaaacaataataccggtaataataaa ggtggtcgtcttgtcgttggccatcgaggtgcaggggctattggttcgaataaaaggcaa ttttatcagaactctggtgcaaactcaaagacatggcctcacttggtcaatttcctggaa agaaaatctttgttaccagctgttatttttgttttcagtaaaaaacgttgtgaagaatat gcggattcattaagcggtgtgaatttctgtgggaacaaggagcggtctcatattcatatg acaatggaaagagcggttgtcagattaaaaaaagaggatagagaattgccacaaattttg aagatgagaacattattagaaagaggcattgctgttcatcatggtggactattacctatc gttaaagagttggtagaaattttattcgcagaggggcatgttaaagttctatttgctacg gagacatttgcaatgggtttgaatttacccacaagaactgtagtttttagtgaaatatcg aagcatgatggaaccaaagtcaggcccttgaatccgggagaattcacccaaatggctggc agagccggccgtagagggttggatactacaggtactgtaattattatgacttataaaact ccattggaacctgttacttttaaagaagtcactttaggatcacccatcagattacaatcg caatttaggttgacttataacatgattttgaaattgttaaaaatagaagccctaagggtc gaagaaatgatcaagtattccttcagtgaagataacaatcaagcattgttaccacagcag caaaaagacatcgcccttttaacagaaagagcagaaagcatcgagttttatgataactgt gaatactgttctcatgatatcgataaagcgctaagcttgtttttagactacaaagaaaat tggaaagaatttgtaagcaagataagtgcctttgctgtttttgctgcgtacttttctact ggacggttagtaatttacagactagaaacacctgatgagtttgtttataaattgggcttt atctttaggtcttttagtaaaagcggtaattgtattgtgttgtgctttactgaagagaat caacttaaattccgcggtaaagtttatattccatatgttattaataaaaaatttatcgga aacaattttggcacttttgttaagttagtcaatcctattttggaggaaatacctattaca aatattgaactagtttccagctataagagtaagacaagattagtttcttatttggccaat gaaaaagaagccattgatctttttgaggaggaaataggttcaattgttaaagatctttca tattttagtgattttgaaccaaaaaaaattttaccactagaagttgggaatttgttaaaa gaaagaaaatcgttatttaaagctatagtaagcttacaagggcccatgacttgtccagat tttgtgcaacatttgtatcctaaatattttaaaagtaccattgaggatcaaatcagtgct ttgaaacatctatcgagcgaccaaaatctaaaattgttacctgattatgaacaaagacta aaggtactaagagatggtgaatttattgacaaaaacgctaatgttttattgaagggaaga gtcgcttgtgagattgatattggatatgaattagtaattaccgaattaatcttggacaat ttcttgggagattttcaaccagaagaaatagttgctttgttatctgtttttgtatatgat ggtacaaataaaaagaatgttgaagaacctattccagctaatgagaggttaacattgggt aaagataaaattgagggaatttataagaaaatgctaaaactttatgaaaaacatcaggtt cctattacatctgaagaggaagatttcttggaaagaagaagatttatgcttttgaatgtt gtttatgaatgggcccgtggtgttgcatttaaagacatcatggagataactgatgaaagt gaaggtactattgttaggattatcaatagattggatgaaatatgccgtgaagtgaaaact gcagctattatcattggtaattctgatttacactccaaaatgtcgactgctcaagaatta attaaaagagacatagtttttgcggcaagtttatatttatga

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