KEGG   Saccharomycodes ludwigii: SCDLUD_004282
Entry
SCDLUD_004282     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCDLUD_004282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slud03009]
    SCDLUD_004282
Ribosome biogenesis [BR:slud03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    SCDLUD_004282
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Cytochrom_D1 NBCH_WD40 Beta-prop_VPS8 Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP PQQ_2 WDR54 eIF2A CPSF_A WDR93 DUF7477
Other DBs
NCBI-GeneID: 70109599
NCBI-ProteinID: XP_045933899
LinkDB
Position
V:complement(1090446..1093295)
AA seq 949 aa
MTQEQSTKKRKIVSQQLTSHSSKHASKIFSPFRVIGNVTNNTPFSIGTLGSTFYIVTSVG
KSFQIYDANNLHLLFVSEGETESFITCLHAHYHHVYVSFSNKIGIYKRGRQESLIEIEQI
KNKRDKINNLLVFGDYLIASTSESQNVFVYRKNNKSNESNTVNINYSFYTSLKGNIVSDI
VSLIHLPTYLNKIVVVTKKNMLLFNIRTGRLLFTSEEFPSEITSAEAAPVLDVLGLTTSN
GEVILYNIRQGRVLRNFRPHGSSRITSLSFRTDGSSHISVGYANGDLVFYDLNRHSRIHV
ISSVHKEINGGVSKSCFLNGQPIIVTAGGDNQLKEYVFDPSLSIDQDDEESTVVQPPRLL
RSRGGHSKPPTKVIFVDKDAHYLLSASQDQSIWAFSLRKDAQSQELSQRPTTKGKKSKLH
GKLPSVTDLAIELTRAGDWDNIVTSHEGSERAYSWNSKTKRLGSHIFETTDGGFVSCVSI
SSCGNFSFIGSSKGGIAVYNLQSGKLRKKFNLHKQSVTGICVDSMNRKMVSVGLDGIVGF
YDFAKSKYLGKLELDSPITQMKHHKTSDLFALALDDLSVVVLDALTQKVVRQFYGHDNRI
TSFDFSPDGRWIVSASLDSTIRTWDLPTGGCIDGVKVDSVATNIVFSPNGEYLATSHVNG
NGISIWTNRAQFKPISTRQIEEEDFVRIMSPTSTSDGGVTMLDGAFDDEDENQDSEYYDN
YTSVEQIDRSLITLSIGPRSKMNTLVNLETIKRRSKPVEPPKKPEKAPFFLQLTGSAVGD
DASNREGVAADTTAQEQLVSQNSSTHTINEANLGTFKPTGRIGFESKFTNLLRTNAETSN
YTEFLGYLLSLSPSSVDLEIRSLNCFEPYDELIWFIEALTFCLKTNKDYDLAEAFMAMLL
KVHGDVIHTHREIKPALVEWNNTHNGKQENLDDLVKFCSSILNFVNTSM
NT seq 2850 nt   +upstreamnt  +downstreamnt
atgacccaagaacaatctactaaaaaaagaaaaattgtctcacagcaattaacttctcac
tcttctaaacacgcatcaaagatcttttctccctttagagttattggtaatgttactaat
aatacaccattttctattggtacattaggttcaacattttatattgtaactagtgttggt
aagagtttccaaatatacgatgccaataatctacatctattgtttgtttctgaaggggaa
actgaatcttttattacttgtttacatgctcactaccatcatgtttatgtctcgttttcc
aataaaattggtatttataaaagaggtagacaagaatcattgattgaaatcgaacaaatt
aaaaacaaaagagataagattaataatctattagttttcggtgattatttaattgcaagc
acttcggaatcccaaaatgttttcgtgtatcgaaaaaataataaatccaatgagtctaat
acagttaatattaattattcgttctatactagtttaaaaggtaacattgtttcagacatt
gtcagtctaatccatctaccaacatatttaaacaaaattgttgttgtgacaaaaaaaaat
atgttgttatttaatattcgtactggtaggttgttatttaccagcgaggaatttccatct
gagattaccagtgcagaagcagcacctgtcttagatgttttaggtttaactacttctaat
ggagaagttatattgtataacattagacaggggagagttttacgcaattttagaccacat
ggctcttcaagaattacatctttatcctttagaaccgacggttcttcacatatttcagtt
ggttatgccaatggggatttggtgttttacgacctaaatcgtcattcaaggatacatgtt
atctcctcggtccacaaggaaattaatggtggtgtttccaaatcttgttttctaaatggt
cagcctattattgtcacagctggtggcgataaccaactaaaagaatacgtgtttgatccg
tcattatctatagatcaagatgatgaggaaagtacagttgttcaacccccaagattgtta
cgttctagaggtggtcattctaaaccacctacaaaagtaatatttgttgataaggatgca
cattacttgttgagtgcctctcaggaccaatctatatgggccttttccttaagaaaagat
gcacaatcacaagaattatctcaaagaccaactactaagggaaagaaaagtaaattacac
ggcaaacttccctccgtcactgatttggccattgaattaacccgtgctggtgattgggat
aatatagttacttcccacgaaggttctgagcgtgcttattcttggaattccaaaacgaaa
aggttaggaagccatatttttgagaccactgatggtgggtttgtgagctgtgttagtatt
tcttcttgtggcaatttctcatttattggtagtagtaaaggtggtatagctgtttataat
ttgcaaagtgggaaattacggaaaaaatttaacttacataaacaatctgttacagggatt
tgtgttgatagcatgaatcgtaagatggtctccgttggtttggacggaatagtcggcttt
tatgattttgctaaatcaaaatatttaggtaagctagagttggactcacccataacccaa
atgaaacaccataaaaccagcgatttgttcgctttggcgttagatgatttaagtgttgtt
gttcttgatgcgctcacgcaaaaagttgttcgtcaattctatggacacgataatcgtatt
acctcatttgatttttcaccagatggtagatggattgtatcagcatctcttgattctact
ataagaacttgggatttgcctacaggcggttgcatcgatggtgttaaagttgacagtgtc
gcaactaacatagttttctctccaaacggtgaatatttggctacttctcacgtgaatggt
aacgggatttctatttggactaatagggctcaattcaaacccatttcaacccgtcaaatt
gaagaagaagattttgtcagaattatgtcccccactagcacaagtgatggtggtgtgaca
atgttggatggtgcttttgatgatgaggatgaaaaccaagattctgagtattatgacaac
tatacctctgttgaacaaatcgacagatcattaattacgttatccattggcccaagaagt
aaaatgaatactttggttaatttagaaaccattaagcgacgttccaaacctgttgagcca
ccaaaaaaacctgaaaaggctccatttttcttgcaattgaccggctctgctgttggtgat
gacgcgtctaatagagaaggcgttgcagccgatactaccgcacaagaacaacttgtatcc
cagaattcatccacacacactataaatgaagccaatttgggtactttcaagcccacgggt
cgtattggatttgagtctaaatttaccaatttattaaggactaatgcagaaactagtaat
tatactgaatttttgggatatttactatccttaagtccatcttctgtagatttggaaatt
agatctttgaattgttttgaaccctacgacgaattgatctggtttattgaagcattgaca
ttttgtttaaaaacaaataaagactacgatttggcagaagcgtttatggccatgttatta
aaggtgcatggagatgtcattcacacacacagagaaattaagccagctctggtggagtgg
aataatacacataacggcaagcaagaaaatttagatgatttagttaaattttgttcatcg
attttaaattttgtaaacacatctatgtag

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