Saccharomycodes ludwigii: SCDLUD_004282
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Entry
SCDLUD_004282 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCDLUD_004282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_004282
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SCDLUD_004282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Cytochrom_D1
NBCH_WD40
Beta-prop_VPS8
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SCAP
PQQ_2
WDR54
eIF2A
CPSF_A
WDR93
DUF7477
Motif
Other DBs
NCBI-GeneID:
70109599
NCBI-ProteinID:
XP_045933899
LinkDB
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Position
V:complement(1090446..1093295)
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AA seq
949 aa
AA seq
DB search
MTQEQSTKKRKIVSQQLTSHSSKHASKIFSPFRVIGNVTNNTPFSIGTLGSTFYIVTSVG
KSFQIYDANNLHLLFVSEGETESFITCLHAHYHHVYVSFSNKIGIYKRGRQESLIEIEQI
KNKRDKINNLLVFGDYLIASTSESQNVFVYRKNNKSNESNTVNINYSFYTSLKGNIVSDI
VSLIHLPTYLNKIVVVTKKNMLLFNIRTGRLLFTSEEFPSEITSAEAAPVLDVLGLTTSN
GEVILYNIRQGRVLRNFRPHGSSRITSLSFRTDGSSHISVGYANGDLVFYDLNRHSRIHV
ISSVHKEINGGVSKSCFLNGQPIIVTAGGDNQLKEYVFDPSLSIDQDDEESTVVQPPRLL
RSRGGHSKPPTKVIFVDKDAHYLLSASQDQSIWAFSLRKDAQSQELSQRPTTKGKKSKLH
GKLPSVTDLAIELTRAGDWDNIVTSHEGSERAYSWNSKTKRLGSHIFETTDGGFVSCVSI
SSCGNFSFIGSSKGGIAVYNLQSGKLRKKFNLHKQSVTGICVDSMNRKMVSVGLDGIVGF
YDFAKSKYLGKLELDSPITQMKHHKTSDLFALALDDLSVVVLDALTQKVVRQFYGHDNRI
TSFDFSPDGRWIVSASLDSTIRTWDLPTGGCIDGVKVDSVATNIVFSPNGEYLATSHVNG
NGISIWTNRAQFKPISTRQIEEEDFVRIMSPTSTSDGGVTMLDGAFDDEDENQDSEYYDN
YTSVEQIDRSLITLSIGPRSKMNTLVNLETIKRRSKPVEPPKKPEKAPFFLQLTGSAVGD
DASNREGVAADTTAQEQLVSQNSSTHTINEANLGTFKPTGRIGFESKFTNLLRTNAETSN
YTEFLGYLLSLSPSSVDLEIRSLNCFEPYDELIWFIEALTFCLKTNKDYDLAEAFMAMLL
KVHGDVIHTHREIKPALVEWNNTHNGKQENLDDLVKFCSSILNFVNTSM
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagaacaatctactaaaaaaagaaaaattgtctcacagcaattaacttctcac
tcttctaaacacgcatcaaagatcttttctccctttagagttattggtaatgttactaat
aatacaccattttctattggtacattaggttcaacattttatattgtaactagtgttggt
aagagtttccaaatatacgatgccaataatctacatctattgtttgtttctgaaggggaa
actgaatcttttattacttgtttacatgctcactaccatcatgtttatgtctcgttttcc
aataaaattggtatttataaaagaggtagacaagaatcattgattgaaatcgaacaaatt
aaaaacaaaagagataagattaataatctattagttttcggtgattatttaattgcaagc
acttcggaatcccaaaatgttttcgtgtatcgaaaaaataataaatccaatgagtctaat
acagttaatattaattattcgttctatactagtttaaaaggtaacattgtttcagacatt
gtcagtctaatccatctaccaacatatttaaacaaaattgttgttgtgacaaaaaaaaat
atgttgttatttaatattcgtactggtaggttgttatttaccagcgaggaatttccatct
gagattaccagtgcagaagcagcacctgtcttagatgttttaggtttaactacttctaat
ggagaagttatattgtataacattagacaggggagagttttacgcaattttagaccacat
ggctcttcaagaattacatctttatcctttagaaccgacggttcttcacatatttcagtt
ggttatgccaatggggatttggtgttttacgacctaaatcgtcattcaaggatacatgtt
atctcctcggtccacaaggaaattaatggtggtgtttccaaatcttgttttctaaatggt
cagcctattattgtcacagctggtggcgataaccaactaaaagaatacgtgtttgatccg
tcattatctatagatcaagatgatgaggaaagtacagttgttcaacccccaagattgtta
cgttctagaggtggtcattctaaaccacctacaaaagtaatatttgttgataaggatgca
cattacttgttgagtgcctctcaggaccaatctatatgggccttttccttaagaaaagat
gcacaatcacaagaattatctcaaagaccaactactaagggaaagaaaagtaaattacac
ggcaaacttccctccgtcactgatttggccattgaattaacccgtgctggtgattgggat
aatatagttacttcccacgaaggttctgagcgtgcttattcttggaattccaaaacgaaa
aggttaggaagccatatttttgagaccactgatggtgggtttgtgagctgtgttagtatt
tcttcttgtggcaatttctcatttattggtagtagtaaaggtggtatagctgtttataat
ttgcaaagtgggaaattacggaaaaaatttaacttacataaacaatctgttacagggatt
tgtgttgatagcatgaatcgtaagatggtctccgttggtttggacggaatagtcggcttt
tatgattttgctaaatcaaaatatttaggtaagctagagttggactcacccataacccaa
atgaaacaccataaaaccagcgatttgttcgctttggcgttagatgatttaagtgttgtt
gttcttgatgcgctcacgcaaaaagttgttcgtcaattctatggacacgataatcgtatt
acctcatttgatttttcaccagatggtagatggattgtatcagcatctcttgattctact
ataagaacttgggatttgcctacaggcggttgcatcgatggtgttaaagttgacagtgtc
gcaactaacatagttttctctccaaacggtgaatatttggctacttctcacgtgaatggt
aacgggatttctatttggactaatagggctcaattcaaacccatttcaacccgtcaaatt
gaagaagaagattttgtcagaattatgtcccccactagcacaagtgatggtggtgtgaca
atgttggatggtgcttttgatgatgaggatgaaaaccaagattctgagtattatgacaac
tatacctctgttgaacaaatcgacagatcattaattacgttatccattggcccaagaagt
aaaatgaatactttggttaatttagaaaccattaagcgacgttccaaacctgttgagcca
ccaaaaaaacctgaaaaggctccatttttcttgcaattgaccggctctgctgttggtgat
gacgcgtctaatagagaaggcgttgcagccgatactaccgcacaagaacaacttgtatcc
cagaattcatccacacacactataaatgaagccaatttgggtactttcaagcccacgggt
cgtattggatttgagtctaaatttaccaatttattaaggactaatgcagaaactagtaat
tatactgaatttttgggatatttactatccttaagtccatcttctgtagatttggaaatt
agatctttgaattgttttgaaccctacgacgaattgatctggtttattgaagcattgaca
ttttgtttaaaaacaaataaagactacgatttggcagaagcgtttatggccatgttatta
aaggtgcatggagatgtcattcacacacacagagaaattaagccagctctggtggagtgg
aataatacacataacggcaagcaagaaaatttagatgatttagttaaattttgttcatcg
attttaaattttgtaaacacatctatgtag
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