Saccharomycodes ludwigii: SCDLUD_004471
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Entry
SCDLUD_004471 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCDLUD_004471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_004471
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
SCDLUD_004471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
70109788
NCBI-ProteinID:
XP_045932982
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Position
VI:complement(162679..165111)
Genome browser
AA seq
810 aa
AA seq
DB search
MMSQQTTSTTNGKKTENIKKNSVSPFRASTASPFIKREQLRRGFFKARMKKLATTKSIGV
KKEDPDLAAAKLLKKEDGLTVDGLVQHPSAKKKKAITTDANQFEEFPLRAVDASALNSVK
THIMKFQSKKKLEPVKDFHLPVRLHRKDTRNLQFQLTRAEIVQRQKEITEYKQKLLEEKG
SKSIPTKYFNSNYTNKNNNDYKNKYNNNDNNNNNNNNNNNKNMGPPKLFNGTSVTNNNNN
DNDNNTSKSTDHQNNTPDIGHGKNKDKDTPDTEHQHNPEEVGKVLYDGKEEPEEFEEGTT
DPLADVAPDGGARVVKRGWPKRRTRKLKLLDENAKKLRFEEFYPWVLEDFDGYNTWVGSY
EAGNSDQYVLLSVETDGSFTMIPADKVYRFTARNKYATLTIEEAEKRIDKNKTSVPRWLM
KHLDDIGTTTTRYDRTMRKLRAVDRRTEEDGEDRGDNSDNELDFDEEFQDDEEAPIIDNN
EEENKESEQRIKKEMLQANAMGLRDDNVELDDDNDDGELFGGKVKKEIDEEGKEVKKALK
KTDLGALYDSDDDEANPYLSKSEDEDEEHEGDDNKDKSKSPAVKKESTDKDNAAVTDSNN
SNNNKSETKKVKNKSPQKGKTKKSKKPIIAVKKSKNGVIVIKGDKTVLDKFPSGEWNPEI
ANKRKLEDILSNKDDKSPSKKRIKKPLENGIPGNTSMKPGMSQDSKISNVNTKGIVSSIS
GGNNVTGNNDNSNNSNNSNKEVSVSNNLLTEQDIIERVTSRKMTLKDLIRDLKKKVSMHP
ENKERMKNYVKRLVKLNNGYLELNTQHVNS
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgatgagccaacaaactacttccaccacaaatggtaaaaaaaccgaaaatattaaaaaa
aattcagtgtcaccatttagagcatctactgcctcgccctttattaagagagaacaattg
agacgtgggttttttaaggctaggatgaaaaaattggccactactaaatcaattggtgtt
aagaaagaagacccagatctagcagctgctaagttattgaaaaaggaagatggccttact
gtcgatggtttagtacaacatccttcggcaaagaaaaaaaaagctattaccactgatgcg
aatcaatttgaagaatttccgttacgggctgttgatgcatcagctctaaatagtgttaag
acacatattatgaagtttcaaagtaagaaaaaattagagcctgtaaaagatttccattta
ccagtacgtttacatcgtaaagatactagaaatttgcaatttcaattaacaagggcagag
attgttcaaaggcaaaaggaaattacagagtataaacaaaaattactggaagaaaagggg
tctaaaagtattccaacaaaatatttcaatagtaattacacaaataaaaataataatgat
tataaaaacaaatataacaataatgataataataataataataataataataataataat
aaaaatatgggaccaccaaaattattcaacggaacttctgttactaataataacaacaat
gataatgataataatactagtaaatctactgatcaccagaacaacacacccgatattggt
catgggaagaacaaagataaagacacacctgatactgaacatcaacacaatcctgaagaa
gtaggtaaagttttatatgatggtaaagaagaaccagaagagtttgaagagggtacaaca
gatccactagcagatgtggcacctgatggtggagcaagggtggttaaaaggggctggcca
aagagaagaactagaaaattaaaattattagatgaaaatgctaaaaaattgagatttgaa
gaattttatccatgggttttggaagattttgatggttataatacttgggttggctcttat
gaggctggtaattcagatcaatatgtcttgttaagtgttgaaaccgatggtagtttcacc
atgatcccagcagataaagtttatagatttaccgcaaggaataagtatgccacattgacc
attgaagaagctgaaaaaagaattgacaagaacaagacctcggtgccacgttggttaatg
aaacatttggatgatattggtactactactactagatatgacagaacaatgagaaagttg
agagctgttgatagaagaaccgaagaggatggcgaagatagaggagataattctgataat
gagttggattttgatgaagaattccaagatgatgaagaggcaccaatcatagataacaat
gaagaagaaaataaagaatccgaacaaagaattaaaaaagaaatgttacaggctaatgct
atggggttgcgtgatgataatgttgagcttgatgacgataatgatgacggggaattgttt
ggtggtaaagttaaaaaggaaattgatgaggagggtaaagaagtcaagaaagctttgaag
aaaactgatttgggtgctttgtatgattccgatgatgatgaagcaaatccgtatttatct
aaaagtgaagatgaagatgaggaacatgaaggagatgataataaagataaatctaagtca
cctgctgtgaagaaggaatcgactgataaagacaatgctgctgttacagatagcaacaac
agtaataataataaaagtgaaaccaaaaaagttaaaaataaatcacctcaaaagggtaag
acgaagaaaagtaaaaagccaatcattgctgttaaaaagtccaagaacggtgttattgtt
attaaaggggataaaacggttttggacaaatttcctagtggcgaatggaatccagaaatt
gctaataaacgtaaattggaggatatactatcaaataaggatgataaatcaccaagtaaa
aagagaattaaaaagccactagaaaatggtatcccaggtaacacatcaatgaaaccaggc
atgtcacaagattcaaagatatcaaatgtaaatactaaaggcatagtttctagcattagt
ggtggtaataatgtcactggtaataacgataatagtaataatagtaataatagcaataaa
gaagtttctgtttcgaataatttgttgacggaacaagatattattgaaagggttacctct
agaaaaatgacattaaaggatttaattagagatttaaagaaaaaagtttctatgcatcct
gaaaataaggaaagaatgaagaattatgtcaaacgtttagttaaactgaataatggatat
ttggaattaaacacccaacatgtcaattcataa
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