Saccharomycodes ludwigii: SCDLUD_004601
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Entry
SCDLUD_004601 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_004601
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
SCDLUD_004601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
DKCLD
Rrp44_S1
DUF5774
Motif
Other DBs
NCBI-GeneID:
70109918
NCBI-ProteinID:
XP_045933105
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All DBs
Position
VI:461328..465317
Genome browser
AA seq
1329 aa
AA seq
DB search
MSNQNHNNNNNNKKEVEQQYATTTGGVNNPKHIHIAHRRSPSELTNLMIEQLSLQRQLEM
VQAQQQQLLAQQQQLNAAAAMTNNNSHGTVPFLPPPPPQPYNLSPNRNTNNTITNNNNSN
GGSNSRSHSRNNSGYEFNRHTRGNDSVSSISSGGGGGGHGHSRRHSLGLNEAKKAAAEEQ
AKRAANATGNTDVTIIVDKAVSKEEQFGFKFPPGPPPASQSSVSSSSSTVSSSNTHNHNN
GNNNSTFSHRRTNSSNSSTYSASPGKNYHFPPRTHYNNSHSVDFTALNNNNNNYYYYDNN
NNAGENMNDFTSPRKSHSRTNSGINSNWRQQQPQQQQQQGGGGNNYLAFNTGNYNNSSSS
GTNHANNSIQPNMQFSPFHKKSLSRDGATLLEPTPPFQPGHKSNLSSSSNNTNNNNNNGN
GRKSLFVPYLPQASIPQLLQEGKLVVGTLRVNKKNRSDAWVSTDGVLDADVFICGSKDRN
RALEGDLVAVELLCVDDVWESKKEKEEKKRRKDAGQVQQDLLNSGEDYHNDATFSPRKDS
SSSHIHGRINSSTSNYDSDSQTTGNNNGNNSGLKRRGSLKQRPTQKKNDDVEVEGQSLLL
VEEEEISNEFKPLYAGHIVAVLDRIPGQLFSGTLGLLRPSQQQQHNNNNHEHRKPKIVWF
KPTDKKVPLVAIPTEQAPKDFVDNAEKYANKLFVAGIKRWPITSLHPFGTLVTQLGEIND
PETEVEAILKDNNFLCDEYLDPVNRAVEKSTFRATPLSEESIAKRPIFDSEENGGIAIIK
QNPFTASDLALNLQTSTDGKTGDSVLQLGVHIVDVTEQIESGSSLDRRARKRSTGVSIPQ
KNVALLPIKVNEELGLEVGKKSATISVVYSINVETMEVIDTVVKESFVVPSQLVNVEDLD
VGCTEFTQQLRSIAGIFMKCRLNMDSLTPRLPLLEGLDDESVKPTLNIFNSDGYVLRELQ
YKANNTVAEIIYTKLGPLSFLRRQSHPLSTKLQSFFQRISNFENVEIDPTTPETCLKSML
AIKDTGVRCGVEILFFKTLQRAKYFVAGKVDPDQFDHYSLNYPLYTHFTAPFRRYSDHVV
HRQLKAVINNIPYEEDIDSLKITAEYCNFKKDCSCHAQEQAIHLLLCKAINDMGNSTDQL
ITLGLVSQVYESSFDVFIPEFGIEKRVHGDQLPVTKAEFDSVNKILELYWQPNVDSATFI
PADEKKPSSYRNSIRNKFKSTSVEIAYNELKSKPMLSEELLKKFSSMKLSPPNFTPLNNS
RTPESSPLEQYLKYTTTRIEGGESYIQEIRELKQVPILLRAEIGMALPCLSVRALNPFLQ
SYNKAGSNS
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccaaaaccacaataataacaacaataacaaaaaggaagtagaacaacaatat
gctacaacaactgggggtgtcaataaccctaaacatattcatattgcacatagaagatcc
cctagtgaattgactaatctaatgattgaacaattatccttacaaagacaactggaaatg
gtgcaagctcagcaacaacagttactagctcaacagcaacaattaaatgccgcagcagca
atgactaacaacaactcacatggtactgttccatttttaccacctcctcctccacaacca
tataatttatctcctaacaggaataccaataacaccatcaccaataacaataacagtaac
ggtggttcaaacagtagaagccattctagaaataattcaggttacgaatttaatcgccac
acgaggggtaatgattctgtatcatccatttcatctggtggtggcggcggcggacatggt
cattcaagaagacattctttaggattgaatgaagctaaaaaggctgctgctgaagaacaa
gctaaaagagctgcaaatgctacaggtaatactgacgttactattattgttgataaagcc
gtaagcaaggaggaacaattcggctttaagtttccccctggtccaccaccagcatcccag
tcctctgtatcgtccagttcttctaccgttagtagttctaatacccacaaccacaataac
ggaaataataatagtactttttctcaccgtcgtactaattcttctaacagtagcacctat
agtgcttctccggggaaaaattatcatttcccaccaagaacccactataataacagccac
agcgttgattttactgctttgaacaacaataacaataactactactattacgacaacaat
aacaatgctggtgaaaatatgaatgatttcacctcaccaagaaaatcacattctagaaca
aattctggaattaactctaattggagacagcaacagccccaacaacaacaacaacaaggt
ggtggtggtaataattatttagcatttaatacaggtaattataataacagcagtagcagt
ggtaccaatcatgcgaacaattctattcaacctaatatgcaattttctcccttccataaa
aagtcgttatcaagagacggagccactttattggaaccaacaccaccatttcaaccagga
cacaagtctaatttatcttcttcctcaaataacacgaataacaacaataacaacggtaat
ggtagaaagtctttgtttgtaccatatttaccacaagctagcattccacaattgttacaa
gaggggaagttggttgttggtactttaagggttaataaaaaaaatagatctgatgcttgg
gtttctacggatggggtgttagatgctgatgttttcatttgtggatctaaagatcgtaat
agggctttagaaggtgacttggtggctgttgaattgttatgtgttgatgatgtttgggaa
tctaagaaggaaaaagaagagaaaaagagaagaaaagacgctggccaagttcaacaagat
ttattaaactctggtgaagattaccataacgatgccactttttcgccccgcaaagactcc
tcttcatcccatatccatggtcgtattaactcctcgacctctaactatgattctgattcg
caaactactggcaataataatggaaacaattccggtttgaagagaagaggttccttaaaa
caacgtccgactcagaaaaagaatgacgatgttgaggttgaaggccaatctttgctatta
gtcgaagaagaagagattagtaatgaatttaaaccattgtacgctggtcacattgttgct
gtcttagatagaattccgggtcaattgtttagtggaactttgggtttattaaggccttca
caacagcaacaacataacaacaacaatcatgaacatagaaagcccaaaattgtttggttt
aaacctacggataaaaaggtccctttggttgctattccaacagagcaagcacccaaagat
tttgtggataacgctgagaaatatgctaataagttgtttgtagctggaattaaacgttgg
ccgatcacctctttacatccttttggtacgttggttacccaattaggtgaaattaatgat
cccgaaaccgaagtggaggccattttgaaggataacaatttcttgtgtgatgaatattta
gaccctgtaaaccgtgctgtagagaaatccacttttagggccactccgttaagtgaagaa
tctattgccaaaagacccatatttgactccgaagaaaatggcggaattgcaattattaag
caaaatccgtttactgcatctgatttggctctaaacctacagaccagtactgacggtaaa
actggcgattctgttttacagttgggtgtccacattgttgatgttacagagcaaattgag
agtggatccagtttggacagaagagcaaggaaaagatctacaggggtttcaattcctcag
aagaatgtggcattgttgcccattaaggtaaatgaggagctaggattggaagttggtaag
aaatctgccacaatatctgtggtttacagtatcaatgttgaaactatggaggttattgat
actgttgttaaggaaagttttgttgtcccctctcaattggttaatgttgaagatttagat
gttggttgcacagaatttactcaacaattaagaagcattgctggtattttcatgaagtgt
cggttgaatatggactcattaactccaaggctgccattgttggagggattggacgatgag
tctgtgaaaccaacattgaacatttttaattctgatggttacgttttgagagaactccaa
tataaggccaataatactgttgccgagataatatatacgaagttgggtccattatccttt
ttaaggagacaatcgcatcctttaagcaccaaattacagtctttttttcaaagaatttct
aattttgaaaacgttgagatcgatccgactacacctgaaacctgtctgaagtcaatgtta
gctatcaaagacacaggggttagatgtggtgtagagattttattttttaagactttacag
agggccaaatattttgtagctggcaaggtggatcctgatcaatttgatcattatagttta
aattatccactatacacccattttacagcaccattcaggagatattctgatcacgttgtt
catagacaattgaaggcggttataaataacattccatatgaagaagatatagattcatta
aagattactgctgaatattgtaattttaagaaagattgttcttgtcacgctcaagaacag
gcaattcatctgttgttatgcaaagccattaatgatatgggtaattctactgatcaacta
ataaccttgggtttggtttcgcaagtttatgaaagttcttttgacgtgtttattccagag
tttggtatcgaaaagagggtccatggggatcagttaccggttactaaggcggaatttgat
agtgtcaataagattttagaattgtactggcaaccaaatgttgatagtgctacctttatt
ccagcagatgagaaaaagccaagtagttataggaattcgattagaaacaaattcaagtct
actagtgttgagattgcttataatgaattgaaatcaaaacctatgttatctgaggaatta
ttaaagaaattttcatcaatgaaattgtccccaccaaatttcactcctttaaataattcg
agaacacccgaatcttctccattggagcagtatttgaaatatactacaacaaggatcgaa
ggcggagaaagttatattcaagaaattcgtgaattaaaacaggttccaattttgttaaga
gcagaaatcggtatggctttaccatgtttatctgttcgtgcattaaacccatttttgcaa
tcgtataataaggccggtagtaatagctaa
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integrated database retrieval system
