Saccharomycodes ludwigii: SCDLUD_004683
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Entry
SCDLUD_004683 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K11374
elongator complex protein 2
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_004683
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
SCDLUD_004683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_Aladin
WD40_Gbeta
Beta-prop_WDR75_2nd
TAF1C_beta-prop
Beta-prop_EIPR1
Beta-prop_pof12
Beta-prop_DCAF12
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_IP5PC_F
KNTC1_N
Beta-prop_Vps41
SBBP
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
70110000
NCBI-ProteinID:
XP_045933182
LinkDB
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Position
VI:<627461..>629878
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AA seq
805 aa
AA seq
DB search
MSVTSEAIFIGANHQSQISDYNKARGIVAYGAGSIIALWKPLEASLKGVFLTLKGHTSLI
TCVRFISNNILISACEDKLIKIWKFDETNDHVQCCQTIDHYQHSITCLTTSRSLGNIFVT
GSTDGSLSIWTLNKESTLFELKHEFTVKRGVFPLTVSLQTISEQDTEENLPFILAVGGTS
VNLFIYSFELNTSTQELSDFKQAAVMEGHEDWIKSLDIRKNGPGSYLLASGSQDRYIRLW
KLSVNEEERESPGKLTLLSNKKYMFEIGESTKVTFNFEALIMGHDDWVSSIQWHESKLQL
LACTADTAVMVWEPDELSGVWICSSRLGELSSKGASTATGSVGGFWSCLWFTNESNEYIL
TNGKTGSFRMWSRSAFDGEDRFKSDNDWIPRLGITGSTKPVTDVAWSSNGYLLSTSLDQT
TRLFSKWIYNADGSERKYPDSWFEFARPQIHGYDMICVEPISDTRFVSAGDEKILRSFDE
PRGVAQLLDKFSGLRSNEEIMPESASLPVLGLSNKAVTDDPDSSLTDLDPNEMETDDNKN
ISYAILSELQSPPLEDQLQRHTLWPEIEKLYGHGYEIVCADVSPDKKLIGSACRSNTYEH
ATIRVFDTDSWLQIKPALPFHDLTVTRVRFSKDNKHLLSVSRDRRWAVWSRNEDNTFTLK
CKNEKPHTRIIWDCDWCPLSFADAFVTASRDKTIKIWKSEGADYTLWGSIKLSEPITAIS
VLDQTINTKIVIVAGCESGAISVYTFDSSFQKVLDFDISLTPSERIGRIRWKPYNKATDK
RLFLAAASSDHSCRIYSLDVNAFRL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaacctctgaagctatatttattggtgcaaaccatcaaagtcaaattagtgat
tacaacaaagcaagaggtattgttgcatatggcgctggctcaattattgccttatggaaa
ccattagaagcatctctcaaaggtgtttttttaacattaaaaggccatacatctttgatt
acatgtgttagatttatctccaataacattttaatttctgcttgtgaagataaactaatc
aaaatttggaagttcgacgaaactaatgaccatgtccaatgctgtcaaaccattgatcat
tatcaacactcaatcacatgtttaactacatcacgctcactgggtaacatttttgttact
ggctctaccgatggtagtttatctatttggactttaaataaggaatcaactttgtttgaa
ttgaagcatgagtttaccgttaaaaggggcgtattcccgctaactgtttcattgcaaacc
atttcagagcaagacacagaagagaatcttccatttatattagctgttggcggtaccagc
gttaatttgtttatttattcttttgaattaaatacttctacccaagagctttcagatttt
aaacaggcagctgttatggaaggccacgaagattggattaaaagcttagatattcgtaaa
aatggaccaggcagttatttgttagcaagcggatctcaagatagatatatacgattatgg
aagctatccgttaatgaagaggaaagggaatcacctgggaaattgacattgttgagtaat
aaaaaatatatgttcgaaattggggaaagcactaaagttactttcaattttgaagcacta
attatgggccacgatgactgggtttcctccatccagtggcatgaatcaaaattacagtta
ctagcttgtactgctgataccgctgtaatggtttgggaacccgatgaattgtctggcgtt
tggatttgcagttccagattgggcgagctttcatctaagggagcctccacagctaccggt
tctgttggtgggttctggtcatgtctatggtttaccaatgaatctaacgaatatatctta
accaatgggaagactggatcttttaggatgtggtctcgtagtgcttttgatggcgaggac
cgttttaaatctgataatgattggataccacgactaggtataaccggttcaacaaaacct
gttactgatgtagcttggtcttcaaatggctatttattatcaacgtctttagaccaaacc
acaaggttatttagtaaatggatttacaatgcagatggttccgaaagaaagtatccggac
tcctggtttgaatttgcgagaccccaaatccatggatacgatatgatctgcgtagaaccc
atttcagacacaaggtttgttagcgctggtgacgaaaagattttaaggtcttttgatgaa
ccaaggggcgttgcccaacttttggataaattttcaggtttaagaagcaacgaagaaatc
atgccagaatctgcatctttgcccgttttagggttgtccaacaaagctgttactgacgat
cccgattcctccttaacagacttggatcccaatgaaatggaaaccgatgataataaaaac
attagctatgctattttatctgaactacaatcaccaccactagaggatcaactacaaaga
cacacgttgtggccagagattgaaaagctttatggacatggttatgaaattgtctgtgca
gacgttagcccagataaaaaattaatagggtctgcttgtaggtctaatacatatgaacat
gctactattagagtattcgatactgattcatggttgcaaatcaagcctgcgttaccattt
cacgatttaacagttacaagagttagattttcaaaagataataagcatttgttatccgta
agtagagatagaagatgggctgtttggtcgagaaatgaagacaacacattcacgttgaaa
tgcaaaaatgaaaaaccgcacaccaggatcatttgggattgtgattggtgtccattgagc
tttgctgacgcttttgttactgcttctagagataagactataaaaatatggaagagcgag
ggcgccgattacactctgtggggatctattaaattgagtgagcctattacagctatatca
gttttggatcaaacaatcaataccaagatagttattgtagctggctgtgaaagtggtgcc
atttctgtttacacttttgattcttcatttcaaaaagttttagatttcgatatttctttg
acaccatctgaaagaataggcaggataagatggaagccatacaataaagcaacagataag
agattattcttggctgcagcaagttctgaccattcatgtcgtatttactccttagatgta
aacgcatttcgactttag
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