Saccharomycodes ludwigii: SCDLUD_004721
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Entry
SCDLUD_004721 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCDLUD_004721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_004721
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SCDLUD_004721
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_THOC3
WDR55
Beta-prop_EML_2
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR11_1st
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
Beta-prop_DCAF12
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
WD40_Gbeta
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
70110038
NCBI-ProteinID:
XP_045933218
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Position
VI:complement(<730353..>732638)
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AA seq
761 aa
AA seq
DB search
MTTSNEVLIHRSRFVNFEQGNITSLAFSHNSNVNKITPNDLRLAVGRSDGQIEIWNPRND
WFQELLIPNAAERSIEGLVWCNIPGESLRLFSIGGTTVVTEWDLSTGLPLRNYDCNSGVI
WSIAINSSHTKLAVGCDNGNVVIINISGGPGVFEHENILQRQDSRVLTVAWKTDDFVIGG
CSDGRIRIWSVKREEYGRLLHTMKVDKSKKESTLIWCVLYLPLRDQIVTGDSTGSVKIWD
FKFATLKQSFKPHDVDVLCLATDATNTRIFSAGIDRKIYNFTYEQQNFKNVSNWTISTNR
LFHASDVRAMASYQSKGADFLVSGGVEKSIIVSSLTSFADSSYRKLSVVPFKPQTIINEE
QRLVCSWKDQVVKIWFIGEDVVTGSNKNYKLVCKLVLKDTENINTCALSKDGQILIVGRL
TVTKIFYLHPTSEVLKVTKLDNRFLSSNGCKNIKFIDNTNVILVTPEDEIFMVDLENEEE
GATKCFSEFKLPDLNSHKSKISYMDKINLMEVSSKFNSALITRICGAVDYIDMTTNEVFP
IARLTNYITAINFNENRKSIILTTAGNKIYEFNVPKNKKLHDDEGDTEESSLTQWSKANS
DFLPVQFSTLKDKCLGIFPDKENRVWFWGNTWLCNFDFSYDIPTSRRKKVSTKRTHDGLT
VVNSNNYIYGGGNSQEVDEDEVDEDEDANMDLYMIKAAKVDRPLLNISSDNNNIFYMCEK
YKPILYAGRLSAEKNEMIVVEMPTLKSSKTGYYNLPKLKFK
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgtctaatgaagtcttgattcatagatcaagatttgttaattttgaacagggt
aacatcacatcattagcattttctcataattcaaatgtaaataaaataacaccaaacgat
ttaagactcgcagttgggagatctgatggccaaattgaaatttggaatccaaggaatgat
tggtttcaagaattattaattcccaacgccgcagaaagatctattgaaggattggtttgg
tgcaatatccctggagaatcactaagattattttctattggtggcaccactgtagtgaca
gaatgggatttgtctactgggttaccattaagaaactacgactgtaattcaggtgtgatt
tggtccattgcaatcaattcatctcacactaagttagcagttggttgtgataatggaaat
gttgttataataaacatttctggtggtccaggcgtttttgaacatgaaaatattttgcaa
agacaagattcaagagtattaacagtagcttggaagaccgatgattttgtgattggtggg
tgttctgatggaagaataaggatttggtccgtaaagagggaagagtatggcagactattg
cacactatgaaagtggacaaatccaaaaaggaatccactttaatttggtgtgttttatat
ttaccattaagggaccaaatagtcactggtgattctactggctcggttaaaatttgggat
tttaaatttgctactttaaagcaatcttttaagccacatgatgttgacgtattgtgcttg
gccacagatgccactaataccaggattttcagcgcaggaattgacaggaaaatttataat
tttacttatgaacaacagaattttaaaaatgtttccaattggaccatatctaccaatagg
ttattccatgcgagtgatgttagagctatggctagctatcaatcaaagggtgcggatttc
ttagtttctggtggtgtagaaaaatctattattgtttcgtcattaacatcatttgccgat
tccagttataggaaactgtctgttgttccgtttaaacctcaaaccataataaacgaagaa
caaagactagtatgctcatggaaggaccaagttgtcaaaatatggtttattggggaagat
gtagttactggcagcaacaaaaattataagctggtttgtaaattagttttaaaagacact
gaaaacataaatacatgtgcattatcaaaagatggccaaattttaattgttggcaggtta
actgtcactaagattttttatttgcatccaaccagtgaagttttaaaagtcactaaattg
gataatagatttttgtcaagtaatggatgtaagaacatcaagtttattgataacactaat
gtcattttagttaccccagaagatgaaatatttatggttgacttagaaaatgaagaagag
ggtgccactaaatgtttttctgagttcaaattaccagatttaaatagtcacaaatcaaag
atttcatatatggacaagattaatttaatggaggttagttcaaaatttaattctgcttta
ataactaggatttgtggtgctgttgattatatcgacatgactacaaatgaagtttttccg
atagcccgtttaacaaactatattactgctattaattttaacgaaaatagaaaatcaatt
attttaactactgctggcaataaaatttatgaatttaatgtaccaaaaaataagaagcta
catgatgacgagggtgatactgaagaaagctctctaacacaatggtctaaagctaattcg
gatttcttaccagtacaatttagcacactaaaggacaaatgcttgggtatttttccagac
aaggaaaatagggtatggttttggggcaacacatggctgtgcaattttgattttagttat
gatattccaactagtagaaggaaaaaagtatctactaaaagaacacatgatggcttgact
gttgttaattctaataattacatatatggtggtgggaattcccaggaagttgatgaggat
gaagttgatgaagatgaagatgccaacatggatttatatatgatcaaagctgctaaagtt
gatagaccacttctaaatatttcatcagataataataatattttctacatgtgtgaaaaa
tataaaccaattttgtatgctggaaggctatctgctgaaaaaaatgaaatgattgttgta
gaaatgccaacattaaaatcctcaaagactgggtattacaacttaccaaaactcaagttt
aaatag
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