Saccharomycodes ludwigii: SCDLUD_004815
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Entry
SCDLUD_004815 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SCDLUD_004815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_004815
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
SCDLUD_004815
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
GOSR1_N
T4SS_LegC2C7
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
70110132
NCBI-ProteinID:
XP_045933306
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All DBs
Position
VI:<942253..>944499
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AA seq
748 aa
AA seq
DB search
MSGSPFTFNLNQPNNNNNNNNDNNKGTFSFGQTGTSSGNSTAPSFSFGLNDKNNSGTNST
LPAFGQSATTASKPLFGQSGSTQTFSFGGANSINPTANSSNGNDVKTPFTFGGLNSATSN
GASEKPTFGFGSNTGDKPGLSFGINNSNTISTTNTENKLPIFGAGTTVTSKTAPSSNASA
GSVLNNNTQSTETAKPTAFNGADANTGETKNAFFSSDNNLSLTNNSGATESATSKPQFSF
GTESTEKKDGKPAVSFGTNPNTVTETKAPVFSLGNATTTSLTNKPAFSFGATTNAIATKT
GEQKDDTKPAFSFGATTTEEKKDKPTFSFGGATNATKTDGKKDSSTTKPAFSFGGATNTA
NSEDKKDGSTTTAAFSFGGATATAKTDDKKDAPTTTPAFSFGAAKTEEKKDKPLFSFGGA
TNTTNSEDKKDGAATKPTFSFGGATTTAKTDDKKDSSTTKPAFSFGGATNTAKTDDKKDS
STTKPAFSFGGATNSSNISNDNNKKENAPIANMNSNSANNMTDNKNGPKEVNLPSTKTKT
VDVPPITLDNKTLDDLVSRWSSQLSTSSAHFEEYTKRVNEWDQVLVQGADQISKLYSNTL
LAEQTQNKVEQSLQYIERQQADLAITLDNFENRTSSLLSDLSLPTTTTTTTTTTDSNTTG
TDDERRKQAYQTALQLDENLDTLSTNLSSLIEQINEVSDKFNKVSNINSSNQEESTEIIK
LLNSHLKALRALDTNSNVLESKLKAFNK
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggtctccttttacttttaatcttaaccaaccaaacaataataataataataat
aacgataataacaaaggtactttttcatttggccagacgggaacatctagtggtaactca
actgcgccttcattttcatttggattaaacgacaaaaataatagtggtactaatagtaca
ttacctgcctttggtcaatctgctacaactgcctccaaaccactatttggccaatctggt
tccacacagactttttcctttggtggtgctaatagtataaatccaacggcaaattcttcc
aatggtaatgatgtgaaaaccccctttacatttggtggcctaaatagtgctacatccaat
ggtgcttctgaaaaacctactttcggtttcggatcaaataccggtgataaaccaggactt
tcttttggaattaataactctaataccatttcgacaacaaacaccgaaaataagctacca
atctttggtgcaggcactactgttacaagtaaaaccgctccttcttcaaatgcttcagct
ggctctgtattaaacaataatacacaatctaccgagactgccaaaccaacggcttttaat
ggagccgatgctaataccggtgaaacgaagaatgcctttttttcatcagacaacaatttg
agtcttacaaataattctggggcaacggaaagtgccacttctaaacctcagttttcattc
ggtactgaatccactgaaaaaaaggatggtaaacctgcggtttcatttggtactaatccg
aacaccgttacggaaaccaaagcaccggtgttttccttgggtaatgctacaactacttcc
ttaacaaataaaccggcgttttcatttggcgctactactaatgctatcgcgaccaagact
ggagaacaaaaggatgatacaaaaccagctttttcatttggtgctactacgaccgaagaa
aaaaaggacaaaccaacattttcatttggtggtgctactaatgctaccaaaaccgatggc
aagaaagatagctcaacaacaaaaccagctttttcgtttggtggagctactaatactgca
aattctgaggacaagaaggatggctcaacaacaacagcagctttttcatttggcggtgcc
actgctactgccaaaaccgatgacaagaaggatgctccaacaacaacaccagctttttca
tttggtgctgccaaaactgaagaaaaaaaggacaagccattgttttcatttggtggtgct
actaatactacaaattccgaggacaagaaagatggagcagcaacgaaaccaactttttca
tttggcggtgccactactactgccaaaaccgatgacaagaaagatagctcaacaacaaaa
ccagctttttcgtttggtggagccactaatactgccaaaaccgatgacaagaaagatagc
tcaacaacaaaaccagctttttcatttggcggtgccactaatagcagcaacatatctaat
gataacaataagaaagaaaatgctcctattgctaatatgaattctaattctgcaaataat
atgaccgacaataagaatggtcctaaagaggtcaatttaccttctaccaaaacaaaaaca
gttgatgttccaccaattacgttagacaataaaacactagatgatttagtttctagatgg
tcttctcaactatccacttcgtctgctcattttgaggagtacaccaaaagagttaatgaa
tgggaccaggttttagttcaaggcgccgatcaaataagtaaattatattctaacacttta
ttggcagaacaaactcaaaataaggttgaacaatcattacaatatattgaaagacaacaa
gcagatttagcaataactttagataattttgagaacagaacttcatccctattatctgat
ttatcattgcctactaccaccaccactaccaccaccaccaccgattctaatacaacgggc
actgatgatgaaaggagaaaacaagcttaccagactgctctgcaattagatgaaaaccta
gatactttatcaactaatctttcctcactaattgaacaaatcaatgaagtaagcgacaaa
tttaataaagtttccaatattaattcttctaaccaggaagaatcaacagaaattattaaa
ttgttaaattcgcaccttaaggctttaagagccctagatacaaattctaatgttttagaa
tccaaattaaaagcatttaataaataa
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