Saccharomycodes ludwigii: SCDLUD_004907
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Entry
SCDLUD_004907 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K08499
member of the syntaxin family of t-SNAREs
Organism
slud
Saccharomycodes ludwigii
Pathway
slud04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
SCDLUD_004907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
slud04131
]
SCDLUD_004907
Membrane trafficking [BR:
slud04131
]
SNARE
SNAP-25[C] (Qc)
STX6
SCDLUD_004907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STX6_10_61_N
SNARE
NPV_P10
DUF745
Sec20
DUF2461
Occludin_ELL
S_4TM
DUF6278
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
70110224
NCBI-ProteinID:
XP_045933396
LinkDB
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Position
VI:<1145288..>1146031
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AA seq
247 aa
AA seq
DB search
MSDPYNNALNNEEDPFYQVLKDLQEQLNDIIANRQLLDSESLEDINETIQDLENSVHVLE
SSGIYSTNTEILKRKNKINDLKNTLQHIQTQTDYTNTAKNTENNYTQDLDNQKQQLFGNS
SHSNRIDDNIPEYENNYDATDDKNNSESHFQMMQQEMLKEQDTHLENIHKTMQNLRLQAN
TMGQELEDQSYLLNDLDQNVDTVMGKLNRGRRQLEWVYEKNKEKYNDICIVLLIVVLIIL
LIVAFIA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccttacaataatgcattgaataatgaggaggacccattctaccaagtttta
aaggatttacaagaacaactaaatgatataattgctaatcgtcagttgttagattccgaa
tcactcgaagatattaatgaaacaattcaagatttggaaaatagtgtgcatgtgttagaa
tctagtggtatctatagtactaacaccgaaatattgaaaaggaaaaataaaattaatgat
ttgaaaaatactttacaacatatacaaacacaaacagattatacaaatactgccaaaaat
acggaaaataattatactcaggatcttgataatcaaaaacaacaactatttggtaattct
tcccattctaatagaatagatgataatattccagaatatgagaataattatgatgccact
gatgataaaaacaactctgaatcacacttccaaatgatgcaacaagaaatgctaaaggag
caagatacacacttagaaaatatacataaaaccatgcagaatttacgtctgcaggcaaac
accatgggccaggagttagaagatcaaagttatttgttaaatgatttagaccaaaatgta
gatacagtaatgggcaaactaaacagaggacggaggcagttggaatgggtgtacgaaaag
aataaggaaaaatataatgatatttgtatagtcttattgatagttgtattaattatctta
ttaattgtggcatttatagcgtaa
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