Saccharomycodes ludwigii: SCDLUD_004939
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Entry
SCDLUD_004939 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCDLUD_004939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slud03009
]
SCDLUD_004939
Ribosome biogenesis [BR:
slud03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
SCDLUD_004939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
NRDE-2
HAT_PRP39_C
TPR_TmcB
HAT
Motif
Other DBs
NCBI-GeneID:
70110256
NCBI-ProteinID:
XP_045933427
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Position
VI:<1222521..>1223843
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AA seq
440 aa
AA seq
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MSSKARYYLEQCIPEVDDLVEHGIFNKSEVTSIMKKRTNFEHRLNSRGSSISDYIRYVEF
EKNVDKLRLKRIKRILQNSKKYSVSDYSIQHRIDFIFQRGCNKFPQDLRFWSLYLNYLKS
RGNKVSYKKIHSVYNQLLRLHPTNVDVWISCAKFEYEVYANFKSCRTVFQNSLRFNPDSS
KLWFEYCKFELNFVTKLITRRKVLNLINEREQEMDMLHQEKANVPDDSNEHEDGIKLPST
GDNMKDKLNELPDTDMSMLGNEETNPALRGDIALTIYDLAMKNLRQKFIEKRRGFYAVTD
GNFEKELIADVNEYLYTISLDYIKLFDNFKALRRDYLITHVLHYLKTLDTIKSSKEYSSY
ITFIDITLNIRYMDTPSFNNTELQKSVQKYLVYKSKIKDKELLKLIRVKYSEYLREKYLI
NMEKDSDPRYSVLAKIINKL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaaagcaaggtactatttagagcagtgcatccctgaagtcgatgatttggtg
gagcatggtatcttcaataagagtgaagttacctcaatcatgaaaaagagaacaaatttt
gaacatcgtttaaatagtaggggctcaagcatttctgattatatcagatatgtggaattt
gaaaaaaatgttgataagttacgtttgaagagaattaaaagaatactacaaaatagcaaa
aaatattctgtttctgattactccattcaacatagaatagattttatttttcagcggggt
tgtaacaaatttcctcaagatctacgtttttggtcactctatttaaattatttaaaaagt
agaggtaataaggtctcatacaaaaaaattcattctgtttacaatcaattgttaagatta
catccaacaaatgtcgatgtttggattagttgtgccaaatttgaatacgaagtttatgct
aatttcaaaagttgcagaacagtcttccaaaactctttaagatttaatccagattcttcc
aaactttggtttgaatattgtaaatttgaattaaactttgtaaccaaattgattactaga
agaaaagttttaaatttaatcaatgagagggaacaagaaatggatatgctacatcaagaa
aaggcgaacgttccggatgacagcaacgaacatgaagatggtattaagttaccttctact
ggcgacaacatgaaagataagttgaacgagttgcctgataccgacatgagtatgctaggt
aatgaagaaacaaatccagctttgcgtggtgatattgcgttgacaatttatgatttggct
atgaagaacttacgtcaaaaatttattgagaaacgtaggggattttatgcagttacagat
ggaaattttgaaaaagaattgatagcggatgttaacgaatatctatataccatatcattg
gattacattaaactatttgacaatttcaaagctttaaggagggactatttaataactcat
gttttacattatttgaaaactttggacaccatcaaatcatcgaaagaatactcatcttac
attacatttattgatatcaccttgaatataagatatatggatacaccttcatttaacaat
accgagttgcagaaatctgtacaaaaatatttggtctataaatctaaaatcaaggataaa
gagctgttaaagttaataagagtgaaatacagtgaatatttaagggaaaagtatttgatc
aatatggaaaaagattctgatcctaggtatagtgtcttggcaaaaatcataaacaaattg
tga
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