Saccharomycodes ludwigii: SCDLUD_005046
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Entry
SCDLUD_005046 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_005046
Enzymes [BR:
slud01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SCDLUD_005046
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCDLUD_005046
Prokaryotic type
SCDLUD_005046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
70110363
NCBI-ProteinID:
XP_045932655
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All DBs
Position
VII:180711..181934
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AA seq
407 aa
AA seq
DB search
MNGIFAIEKPSGITSSQFLSQVQKLFMKSKIFQHEIGEQIRERTEQYKRETGGRLPSRKM
LRKSSKIKMGHGGTLDPLASGVLVIGIGKGTKQLSQYLHGTVKCYEAEALLGASTTSGDC
EPNGEIISLNSVNFLKSLTNTDSIIDDLTQKFKGHLKQTPPIFAALKMNGKPLHEYAREG
LPLPKPIEPRELEISELVINKEDFLSTSHNYKFLPITDSLLEDLTKLEENNANNGTPLFY
SKEYCESHNLPIDKDNKPKDTHPITREEAEHIMKLSTSYRAPLLHFIAKVSSGTYIRSLI
TDMGKSLGTSAYMVKLIRLSQKDWDLTKNNVFKLENFVDVEESIWSKVLKKVLDEGPSVD
IQREIETLTLESKEKEQVEQEGCPDTKKHSIEIEEDIEHPDKKRKDI
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtatttttgctatagaaaagcccagtggtattacctcatctcaatttttgtct
caagttcaaaaactttttatgaaaagtaagatatttcaacatgaaataggtgaacaaatc
agagaaagaactgagcaatataaacgtgaaacaggcggtcgtttaccatccaggaaaatg
ctacgtaaatcatcaaaaataaaaatgggacacggtggcactttagatccattggcttca
ggtgtattagttattggtattggtaagggtaccaaacaactgtcacaatatttacatggc
actgtaaaatgttatgaggctgaagcacttttgggagcatccaccactagtggggattgt
gagccaaatggcgaaattattagtttgaacagcgtgaattttttaaaatctttaactaat
actgattcaataattgacgatttgacccaaaaatttaaaggtcatttaaaacaaacaccg
cccatttttgctgctttgaaaatgaacggcaagccattacacgaatatgctcgtgaggga
ttacctttaccgaaaccaattgagcctagagaattggaaatttctgagctggttattaat
aaggaggattttttaagtactagtcataattacaaatttttaccgattactgattcatta
ttagaggatttaactaaacttgaggaaaataatgctaacaatggaacaccattgttttat
tctaaagaatactgtgagtcgcataatttgcccatcgacaaggataataaacccaaggac
acacatcctattaccagagaagaagctgaacatattatgaagttatctactagttacagg
gcacctttattacattttattgccaaagtttcttccgggacatatattcgttcattaatc
acagacatggggaaatcattgggtacttctgcctatatggttaagttgataagattaagc
caaaaagattgggatttaaccaaaaataatgttttcaaattggagaatttcgttgatgtt
gaagaatccatttggagcaaagtattgaaaaaggttttggatgaaggcccatctgttgat
attcaaagagaaattgaaacattgacattagaaagtaaagaaaaagaacaggtggaacaa
gaaggttgtcctgacacgaagaaacattctatagagattgaggaagatattgaacaccct
gataaaaaaagaaaggatatataa
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