Saccharomycodes ludwigii: SCDLUD_005065
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Entry
SCDLUD_005065 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K14655
tRNA pseudouridine32 synthase / 2,5-diamino-6-(5-phospho-D-ribitylamino)-pyrimidin-4(3H)-one deaminase [EC:
5.4.99.28
]
Organism
slud
Saccharomycodes ludwigii
Pathway
slud00740
Riboflavin metabolism
slud01100
Metabolic pathways
slud01240
Biosynthesis of cofactors
Module
slud_M00911
Riboflavin biosynthesis, fungi, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
SCDLUD_005065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slud03016
]
SCDLUD_005065
Enzymes [BR:
slud01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
SCDLUD_005065
Transfer RNA biogenesis [BR:
slud03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCDLUD_005065
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
dCMP_cyt_deam_1
MafB19-deam
S4
SYY_C-terminal
RluD_N
Motif
Other DBs
NCBI-GeneID:
70110382
NCBI-ProteinID:
XP_045932671
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Position
VII:complement(<210074..>211834)
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AA seq
586 aa
AA seq
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MSSDLDPTVNNNKRTNSSNEIPAQSEDSSLDNKKLKTTGHNKASLRDQSGFKLRSQNADR
KANKKMTEPEFEVYIAGPLRKIKPYFFEYNTFCKMRWRNRNLLDIFVSEFRDRSKEYYEK
TIASGAVLINGEPANLDTLVKNGDLIQHKVHRHEPPVTSREIKIVFEDDDLVVIDKPSGV
PVHPTGRYRFNTITKILERQLGIPVHPCNRLDRLTSGLMFLCKTPKGADKMREQMKSREV
SKEYVARVIGEFPVDKDLTVDLPLLTIEPKLGLNGVCFSKENIDCKTAITSFTRISYDGK
TSIVKCKPHTGRTHQIRVHLQYLGFPIANDPIYSNIDAWGPNLGKNGDADLGKVVQILDS
VGKNRSASSWYYRDNVNGEMLKNEQCSVCETELYTDPGINDLDLWLHAYKYESTDKTKPW
SYKTEFPKWALEPHKKYMELAIEEAKKCEATTTAFSVGAVLVNGDKILSTGYSRELPGNT
HAEQCCIEKWNAKNKGDIPEGSVLYTTMEPCSLRLSGNKPCVDRIIDLKGKIRTVFVGVM
EPDTFVKNNVSLSKLNECNIDYILVPGYEQECNKAAFKGHPGQSLV
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgaccttgatcctactgttaacaacaataaaaggacaaactcatcaaatgaa
atacctgctcaatctgaagattcctcattggataacaagaaattgaagacaacaggtcac
aacaaggcttctttaagggaccaaagtggattcaaattaagatctcaaaatgccgataga
aaggcaaacaaaaaaatgacagagcccgaatttgaagtctatattgctggacctttacgc
aaaatcaaaccatatttttttgaatacaacactttttgcaagatgagatggagaaataga
aatttgttagacatttttgttagcgagtttcgagatcgtagcaaagaatactatgaaaaa
accattgctagcggtgccgttttaatcaacggggaaccagcaaacttggacactcttgtt
aagaatggggatttaatacaacataaagtccacagacatgaacctccagttactagcaga
gaaattaaaattgtttttgaagatgatgacttagtggtcattgataaaccaagtggtgtt
cctgtacatcctactggcagatacagatttaatacaataaccaaaattttagaaaggcaa
ttaggcatcccagtacatccatgtaatagattagacaggctgactagcggattaatgttt
ttgtgcaagacacctaagggtgctgataaaatgcgggaacaaatgaaatcaagagaagtc
tccaaggaatatgtagcaagagttattggtgagttcccggttgacaaagaccttacagtt
gatttaccattgctgactattgagccaaaattgggtttaaacggcgtgtgtttttcaaaa
gagaatatagattgtaaaactgcaattaccagttttactaggataagttacgatggcaaa
accagcattgtaaaatgtaagcctcatactggtcgaactcatcagattagagtacatttg
caatacttggggtttccaattgctaatgaccctatttattccaatattgatgcatggggc
cccaatttggggaagaatggcgatgctgatttgggaaaggttgttcaaatcttggattct
gtgggtaaaaatagatctgcttctagctggtattatagagataacgttaatggggagatg
ttaaaaaatgaacagtgttctgtttgcgaaactgaattgtatacagatccaggtattaat
gatttagatttatggttacatgcctataagtatgaatccacagataaaacgaaaccatgg
agttacaaaacggagtttcctaaatgggctttggagccacacaagaaatatatggaattg
gctatagaagaagcgaaaaaatgtgaagcaacaacaacggcatttagtgttggcgctgtt
ttagttaacggagataaaattttatcgacagggtattcaagagaattacctggcaataca
catgcagaacaatgctgtattgagaaatggaacgcaaaaaacaagggagatataccggag
gggagtgttttatataccactatggaaccttgctctttaagactaagtgggaataaacct
tgtgttgatagaattatcgatttgaaggggaaaataagaactgttttcgttggtgtgatg
gaacctgatacttttgttaagaataatgtaagcctcagtaaattaaacgagtgtaatata
gattacattttagtacctggatatgaacaggagtgtaataaagcagcattcaaaggtcat
cctggtcaatctttggtataa
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