Saccharomycodes ludwigii: SCDLUD_005084
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Entry
SCDLUD_005084 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCDLUD_005084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slud03019
]
SCDLUD_005084
Messenger RNA biogenesis [BR:
slud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
SCDLUD_005084
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
70110401
NCBI-ProteinID:
XP_045932685
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Position
VII:232680..233816
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AA seq
378 aa
AA seq
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MNAIQAPQQPPGVVNPVFMNNTSGTTATTNTPTAPTNNANYNNPTINGTNINNNNKPTNN
INTTTTTTRALDDPNVYHWICQLAYGPQKEQALLELGRKREQYDDLAIVLWCSFGVITSL
IQEIISVYPLLHPPTLTHQLSNRVCNALVLLQCLASHRETKFKFIQAQLPFYLFPFLSTT
SKNRSFEYLRLTSLGVIGALVKNDSPEVIQFLLRTEIIPLCLRIMETSTELSKTVAIFIL
QKILMDDNGLQYICVTQERFMAVSTVLTHMIDQLSEQVGGTATTGNINTLQINNNNINSN
SNTNTNTNNPTTNMSPGRLLKHIVRCYLRLSDNIEARQVLKHVLPRQLMDDTFNESLKED
VNTKRCLAQLLLTLNEEN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctattcaagcaccacaacaaccaccaggggttgttaatccagtttttatgaac
aatactagtggcactaccgccaccactaatacccctaccgcacccacaaataatgccaac
tataataatcctactattaatggcacaaatattaacaataataataagcccactaataac
atcaacaccactaccacaaccaccagagcattagatgatcctaatgtttatcactggata
tgtcaactggcttatggaccacaaaaggaacaagccctattagaattgggcaggaaaaga
gaacaatatgatgatctagctatagttttatggtgcagctttggtgtgattacaagttta
attcaagaaattatttcagtgtacccacttttacatccgcctacgctaacccatcagtta
agtaatagagtttgcaatgctttggttttattacaatgtttagcttcccatagagaaact
aagtttaagtttattcaagcacagctacccttttacctatttccatttttgagtacaacc
agcaaaaatagaagctttgaatatctaagattgacttccttaggtgttattggggcacta
gtgaaaaacgatagcccggaagttatacagtttttgttaaggacagaaataataccactt
tgcttgagaataatggaaacttctactgaattatcgaaaacggtggccattttcatcttg
caaaagatattgatggacgataatggcttgcaatacatttgtgtcacccaagaaagattt
atggctgtatctactgttttaactcatatgattgaccaattatctgaacaggttggagga
actgctactacaggcaatattaatactttgcaaataaataataataatataaattctaat
tctaatacaaacaccaacaccaataaccctacaacaaatatgtcacctggtaggttgtta
aaacatattgttagatgttatttacgtttaagtgataacatagaggcacgtcaagtatta
aaacatgttttacctcgtcagttaatggatgatacttttaacgaaagcttgaaagaggat
gttaatactaaaagatgtttggctcaattgttgctaacattgaatgaagagaattag
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