KEGG   Saccharomycodes ludwigii: SCDLUD_005090
Entry
SCDLUD_005090     CDS       T08289                                 
Name
(RefSeq) hypothetical protein
  KO
K10755  replication factor C subunit 2/4
Organism
slud  Saccharomycodes ludwigii
Pathway
slud03030  DNA replication
slud03410  Base excision repair
slud03420  Nucleotide excision repair
slud03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:slud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SCDLUD_005090
   03410 Base excision repair
    SCDLUD_005090
   03420 Nucleotide excision repair
    SCDLUD_005090
   03430 Mismatch repair
    SCDLUD_005090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slud03032]
    SCDLUD_005090
   03036 Chromosome and associated proteins [BR:slud03036]
    SCDLUD_005090
   03400 DNA repair and recombination proteins [BR:slud03400]
    SCDLUD_005090
DNA replication proteins [BR:slud03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    SCDLUD_005090
  DNA Replication Termination Factors
   ELG1-RFC complex
    SCDLUD_005090
Chromosome and associated proteins [BR:slud03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    SCDLUD_005090
DNA repair and recombination proteins [BR:slud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     SCDLUD_005090
  Check point factors
   HRAD17(Rad24)-RFC complex
    SCDLUD_005090
SSDB
Motif
Pfam: Rep_fac_C AAA_lid_RFC1 AAA_assoc_2 TcdB_N AHD RCF1-5-like_lid C2c1_helical_1st
Other DBs
NCBI-GeneID: 70110407
NCBI-ProteinID: XP_045932689
LinkDB
Position
VII:<241982..>242590
AA seq 202 aa
MTSGAQQALRRTMEIYSDTTRFAFACNQSNKIIEPLQSRCAILKFNKLTDEQVLKRLLEI
IKLEGNIDYTNDGLEALIFTADGDMRQAINNLQSTVAGFRLVNGDNVFKIVDSPHPLIIT
KIILSDSLDEALDQLKKLWNDGYSPTDIITTFFRVVKNLNQLKEPTRLEMMKFIGFTHLR
ILEGVTTYLQLAGLVCNLHKLK
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaccagtggtgcccaacaagctttaagaagaaccatggagatatatagtgacaccacc
cgatttgcctttgcttgcaatcaatcaaataaaattatcgaaccgttgcaaagtcggtgt
gctatattgaaatttaacaagttgacggatgaacaagttttgaaaagattgttggaaatt
attaagttggagggtaatatagactatactaatgatggtttggaagctttaattttcact
gcagacggcgatatgagacaagcaataaacaatttgcaaagtacagttgctgggtttcgt
ttagttaatggtgataatgttttcaaaattgttgattctccacacccattaataattacc
aagattattttaagcgacagcttagatgaagctttagatcaactgaaaaagttatggaat
gatggatactcgccaacagatattataaccacgtttttcagagttgttaagaatttgaat
caattgaaagagccaacccgtttagagatgatgaaatttattggtttcacgcatttaaga
attttggaaggtgttactacttatctacaattggctggattagtttgcaatttacataaa
cttaaataa

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