Saccharomycodes ludwigii: SCDLUD_005182
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Entry
SCDLUD_005182 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
slud
Saccharomycodes ludwigii
Pathway
slud03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SCDLUD_005182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_005182
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SCDLUD_005182
Prokaryotic type
Archaeal type
TFB
SCDLUD_005182
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GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
HEAT_PSME4
Motif
Other DBs
NCBI-GeneID:
70110499
NCBI-ProteinID:
XP_045932776
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Position
VII:441449..442618
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AA seq
389 aa
AA seq
DB search
MSFQVNATATATAAGAPRRHGPNLNIVISCPECKVYPPKVVERFSEGDIVCALCGLVLSD
RIIDTRSEWRTFSNDDQNGDDPSRVGEASNPLLDGSHLSTRIGPNTVGGDLKMTRELNRA
QSKSIVDKRDNELQVAYAKITVMCDAAELPKIVKDCAKEAYKICFEEKILKGKSQESIMA
SVILVGCRRAKVGRSFKEILSLTNVKKKEIYKTFNIIKNVLKEKNATGFANIDTANISSG
QTSAETFIPRFCSHLGLSVQVANAAEYIALHCKDINVLAGKSPITIAAAAIYMSILLFNL
DLSPAQVSRTLQVTEGTIKTGYKTLYEHKEIVIDPRLIESGKVRIENLPKPNERAANGTA
ATNTNIPVITPAATPAPASLKEEVKTGGK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccaagtcaacgccactgccactgcaacagcagcaggtgcacctagaagacat
ggtcctaatttaaatattgtaatttcctgtcctgaatgtaaagtttatccaccaaaagta
gttgaacgtttcagtgagggtgatatagtttgtgccttgtgtggattagtcttgagtgat
agaattatcgatacccgttctgaatggcgtaccttttcaaatgatgatcaaaatggagat
gacccaagccgtgtcggtgaagcctctaaccccttattagatggctcgcatctatccacg
agaattggtcccaacacagttggtggtgacttaaaaatgaccagagaattgaaccgtgca
cagagtaaaagtattgttgacaaaagagacaacgagttgcaagtggcttatgctaaaatt
actgttatgtgtgatgcagcagaattgcccaagattgttaaagattgtgcaaaagaagcc
tataaaatttgtttcgaagaaaaaatcttgaaaggtaaatcacaagaaagtattatggct
agtgtcatcttggttgggtgtcgtagggctaaagttggtagatcttttaaggaaatttta
tccttgacaaacgttaaaaaaaaggaaatttacaagacttttaatattatcaaaaatgtg
ttaaaagaaaaaaatgccaccgggtttgccaatatcgatacagcaaacatttcttcaggc
caaacctctgcagaaacctttattcctcgtttttgttctcatttggggttatctgtccag
gttgctaatgcagctgaatatattgctttacactgtaaagatatcaatgtattggctggt
aagtctccaatcaccattgctgctgccgcgatttatatgtctattttgttatttaatttg
gatctaagtccagcacaggtttcacgtactttgcaagttactgaaggtaccatcaagaca
ggatataaaactttatatgaacataaagaaatagttattgatccaagattaatagaatcc
ggtaaggttagaatcgaaaacttacctaaaccaaatgaaagagctgcgaatggcacagcg
gcaactaatacaaacattcctgtaattacaccagcagctacaccggcacctgcttcatta
aaagaggaagttaaaacagggggaaaataa
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