Saccharomycodes ludwigii: SCDLUD_005205
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Entry
SCDLUD_005205 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K11292
transcription elongation factor SPT6
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slud03021
]
SCDLUD_005205
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_005205
Transcription machinery [BR:
slud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SCDLUD_005205
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
SCDLUD_005205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Spt6_S1
Tex_central_region
SPT6_acidic
SH2
HHH_9
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
70110522
NCBI-ProteinID:
XP_045932799
LinkDB
All DBs
Position
VII:<491306..>495931
Genome browser
AA seq
1541 aa
AA seq
DB search
MEQEDQSIEKSSQEKQALNHQENTNIVEKEQEVRSKDEEEEEEEGYDVFDSSDEDDEEDD
ENSEEAAKIKDGFIVDDNDDDEEEDEEEEIGSNKNIKDKKKKRRRRRREEDDALSEDDLD
LLLENTGVQRPASKPKRGRLKRLKRSNVGVDSDRVEDEEEEEEKEEEKEEEGEEGENLGQ
QDRDNRVKKQGSSSVSARPAVEDFFSSDDDDAMDANVSGDDNNDFATDSTVNKKNRKAVE
TDIGNRLDDFDDFIEEDEFSDEDEETRQARLKQRREQREKNPLRITGLSPDKIDEMFEIF
GDGHDYDWALAVEDEDEDEFAENEYDEDEDEDDIESGGGNRSRNAKKVTLKDVYDLQDLK
KNLMTDEDIIIRKKDIPERFQEIRQGIQSYDESLTDDERKLENKWISDKIANYKNFQPGS
DLSEFEEAIGFAINFISKENLEVPFIYAYRRNYISSKTADGFVLNEDDLWEIVYLDIEFH
SIVYKKRYVENFYKQLNVFDSVVEEYFANQTTKTDLNALQDIYNYLEFNYAQEINQVLQK
QSKKHLKYSNYEKFKNSSLYQVVKDFGISSEHLGENIINQTQIHPVVDHPTMAPKEAVSA
ALVNDADQVSIFASNHKLALETVVKYLALEISHNTHIRERVRHDFYQYYVADVKLTPKGK
SEIQKGSPYEDIKYAINRTPQSFHKNPDVFLRMLEAEQQHYLQVSIHMSSQSQYTEHLFH
ECLESTDTNEIAVEWNEMRKKVFEKSLEKIFHDIASEIKDNLKKMCETLISRNVRHAFLR
RLDQAPYIPNVKDAKIPKVLSITCGNGKFGSDAIIATLVNRKSELAREFKIVANPFDRKQ
QEGARDGFESRFEEIVNVCQPNCIAINGPNPQTSRFAKKLQEIITRKRLIDGRSGNLIPL
VFVDDQVAICYQHSKKSEEEFPGKSILVKYCIALARYLHSPLLEYASLSAEELICLNIHP
HQSLLPKEFLTRCLESCFVDIVNLVGVEINKTVDNKYYSRLLPYVSGFGKRKAIDFVESL
QRLNEPLLARQQLITHGILQKTIFMNASGFLYIDWNTDHKNKNGKKKNKISHYEEEFEHD
LLDSTRIHPEDYHLATKVAADALETDPDIIKEKEENRTMNEFVEMLQKDPDGKEKLESLN
LEQYAEELEKNTGARKLNNLNTIVLELLDGFEELRNDFHPMTNEEIFYNLTGETDRTFFK
GCIIPIRVEHFRNNGGEIICVSNSGIECTVPAQRHLGYQQRRPAIDIYEMGKTYPAKILY
INYDNISCEVSLLPHDIEQQYVPIHYSKDPSIWDIQQEIRDLEKEREITMMEARAKRKHR
VINHPYYYPFTGRQAEDYLRSKERGDFVIRQSSLGDDHLAITWKLDKDLFQHVDILEQDK
ENPLSIGKTLIVENERYHDLDQIIVDYLQNKVRLLNEITNNEKFKNGTKKEVIKFVEDYS
KVNPNRSVYYFSFNYDHPGWFYLMFKINDRSKLYVWNVKLTHTGYYLVNYNYPTVIQLCN
GFKTLLKSNRTQRTSGGGATSSGNSNVNVNTSNGATTGTSY
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagaagatcaatcaatagaaaaatcttcacaagaaaaacaagccctaaaccat
caagaaaatactaatattgtcgagaaagaacaagaagtaaggagcaaagacgaggaagaa
gaggaggaagaaggttatgatgtttttgattcttctgacgaagatgacgaggaagatgac
gaaaattcagaagaagcagctaaaattaaagatggatttattgtagacgataacgatgat
gatgaagaagaagatgaagaggaagaaattgggtcgaacaagaacataaaagataaaaag
aaaaaaagaagaagaagaagaagggaggaagatgacgctttaagtgaagatgatttagac
ttattattggaaaatactggtgtgcaaagaccagcttctaaacctaaaagaggaaggtta
aagagattgaagaggtccaacgtaggcgttgatagcgacagggtagaagacgaagaagaa
gaagaagaaaaagaagaagaaaaagaagaagaaggagaagaaggagaaaatctgggccaa
caagaccgtgacaatagggttaaaaaacaggggtcttctagtgtttctgcaagacctgcg
gtcgaagattttttttcttcggatgatgatgatgccatggacgcaaatgtttctggcgat
gataacaatgattttgccactgactctactgtaaacaaaaaaaacagaaaagcagttgag
actgacattggtaataggttggatgatttcgatgattttatcgaggaggatgaatttagt
gatgaagatgaggaaaccagacaagctagattaaaacagcgtagagagcaacgtgagaaa
aacccattgagaataacagggctatcacctgataaaattgatgaaatgtttgaaattttc
ggtgatggtcatgactacgactgggctctggctgtggaagacgaagatgaagatgaattt
gctgaaaatgagtacgatgaagatgaagatgaagacgatattgaatctggtggtggaaat
cgttccagaaacgccaaaaaggtgactttgaaagatgtctatgacttgcaagacttgaaa
aagaacttgatgaccgatgaagatataataattcgaaaaaaagacatacctgaaagattt
caagaaattagacaaggtatacaatcgtatgatgaatctttaactgatgatgaaagaaaa
ttagaaaataaatggatcagtgataaaattgcaaactacaagaactttcaacccggttct
gacttatctgaatttgaagaggctattggatttgccataaatttcattagcaaagaaaat
ttagaggttccctttatttatgcatatcgaagaaattatatttcttcgaaaacagcagac
ggttttgttttgaatgaagatgatttgtgggaaatagtttacttggacattgaatttcat
tctattgtttataagaagaggtatgtggaaaatttttacaagcagctgaatgtttttgat
tccgtggttgaggaatattttgccaatcaaacaaccaaaaccgatttaaacgccttacaa
gatatttacaactacttggagtttaattatgcccaggaaattaatcaagttttgcaaaaa
caatccaagaaacatttgaaatattccaactacgaaaaatttaagaatagtagcttgtac
caggtggtgaaagattttggaataagcagtgagcatttaggcgaaaatattattaaccaa
actcaaatacatcctgttgtggatcaccctaccatggcaccaaaggaggctgtttccgct
gctttggtcaacgacgcagaccaagtctctatttttgcctccaaccataaactagctttg
gaaacagtggtaaaatatttggctttggaaatttcacacaacacccatattagggagcgt
gtcagacatgatttttaccagtactacgttgccgatgttaaactaacaccaaaggggaaa
agcgaaatccaaaaggggtcgccatatgaagacattaagtatgcaattaacagaaccccg
caatccttccataaaaatccagatgtttttctaagaatgctggaagctgaacaacagcat
tatttgcaagtctccattcatatgtcatcacagtcccagtacacggaacatttgttccat
gaatgcttggaatctaccgataccaatgaaatagcggttgaatggaatgagatgagaaaa
aaagtttttgaaaagagtttggaaaaaattttccatgatatcgcttctgaaattaaggac
aatttaaagaaaatgtgcgaaactttaatcagtagaaatgttcgtcatgcatttttacga
agattggaccaagcgccgtacatacctaatgtaaaagatgccaagattccaaaggtgtta
agtattacgtgtgggaatggtaaatttggtagtgacgccattattgctacgttggtaaat
cgcaagtctgaattagcaagagagtttaaaattgtggctaatccattcgataggaaacaa
caagaaggtgcgcgtgatggatttgaaagcagatttgaagagatagttaatgtctgccag
ccaaactgcattgctattaatggaccaaacccacaaacatctagatttgccaagaagttg
caggaaataatcaccagaaaaagattaattgacggtagaagcggcaacttgatcccatta
gtttttgttgatgatcaagtagcgatttgttatcaacactcgaagaaatctgaagaggag
ttcccaggtaaatcgattttggtcaagtattgtatagccttggcccggtatttgcattcg
ccgctattagaatatgctagtctatctgcggaggagctaatttgtttaaatatacaccca
catcagtcgcttttgcctaaagaatttttgaccagatgtttagaaagttgttttgttgat
attgttaatttggtaggtgttgaaattaataagactgtagacaacaaatattactctcgt
ttattaccatatgtttccggatttggtaaacgtaaagctattgattttgtggaatcttta
caacgactaaacgaaccattattagcacgccagcaattaattacgcatggcatcctacaa
aaaaccatttttatgaacgcatctggctttttgtatattgattggaataccgatcataag
aacaaaaatggtaaaaaaaagaataaaatctcgcactacgaagaagaatttgaacatgat
ttattggatagcaccagaatccatccagaagattaccatttggccaccaaagttgcagca
gatgctttggaaacggatccagatattattaaggagaaagaggagaacagaacaatgaat
gagtttgtagaaatgttacaaaaagacccagatggtaaagaaaaattggaaagcttgaat
ttggagcaatatgctgaagagttagaaaaaaacactggggccagaaaattgaacaatttg
aacactattgtgttggaattattggatgggtttgaagaactaagaaatgatttccatcca
atgacaaatgaagaaatcttttataatttaacgggtgaaactgatagaacgtttttcaag
ggatgtattattcctataagggttgaacattttagaaataatggtggagaaattatttgt
gtctctaatagtggtatcgaatgtactgttccggcacaacgtcacctaggttaccaacaa
aggaggcctgccattgacatttacgaaatgggtaaaacatatcctgccaagatactatat
atcaattacgataatattagttgtgaagtttcactattgccgcatgatattgaacaacaa
tatgttccaatacattatagtaaagacccaagtatctgggatattcagcaagaaatccgt
gatttggaaaaggagcgggagattactatgatggaggcacgtgctaaaaggaagcatcgt
gttattaatcatccttactattatccctttactggcagacaagctgaagattacttgaga
agcaaagagcgtggtgattttgttattagacaaagttcgttgggcgatgaccatttagcg
attacttggaaactagacaaagatttgttccaacatgttgatattttggaacaagacaaa
gaaaacccattgagtataggtaagacattgattgtagagaatgaacgctatcatgatttg
gatcaaattattgtagattacttacaaaacaaagtcagattgttgaatgagataaccaat
aatgaaaaattcaagaatggcactaaaaaggaggttatcaaatttgtggaagattattcc
aaagttaatcccaacaggtcggtttattatttcagttttaactacgatcatccaggttgg
ttttatttgatgtttaagatcaatgataggagcaagttgtatgtttggaatgttaaatta
acacatacagggtattacttggttaattataattatccaacagttattcaattatgtaat
gggtttaagacattgttgaaatcgaacagaacgcagcgcactagtggaggaggtgctact
agtagtggtaacagtaatgtgaatgttaatacgagtaatggtgctactacaggaacttcg
tattga
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integrated database retrieval system
