Saccharomycodes ludwigii: SCDLUD_005239
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Entry
SCDLUD_005239 CDS
T08289
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
slud
Saccharomycodes ludwigii
Brite
KEGG Orthology (KO) [BR:
slud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
slud03036
]
SCDLUD_005239
03400 DNA repair and recombination proteins [BR:
slud03400
]
SCDLUD_005239
Chromosome and associated proteins [BR:
slud03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
SCDLUD_005239
DNA repair and recombination proteins [BR:
slud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
SCDLUD_005239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
TPR_DNAAF5
HEAT_GCN1_C
Cnd1
CLASP_N
NOA36
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
70110556
NCBI-ProteinID:
XP_045932830
LinkDB
All DBs
Position
VII:complement(<561445..>565245)
Genome browser
AA seq
1266 aa
AA seq
DB search
MSNRNNQNLQFNKEIISSIDYHIPLQELIERLSELHDELSNIDQDTINLVSVDKYRKDLL
DSKLIANKSNGVQAFTACCLSDILRIYAPDAPYTDNELAEIFKLFFRQLKYLSDPENGYF
LQQVYLLTKLVEVRSIVLITDLPKSANLISKLFQVFYDPQSNQIPISKLSLVGDLLGEVV
SEADVLSMDVLKLIFNKFLTYDLNSVPRGLNVAHDSCFQFTLHICEKYSNRMGRHLTKFY
SEILYGLASTNKANKNSNHNYREEEEGNKEDGIVNITSVNDESYKTLTNLHTLVLKLWLY
VPELLSSINGFLFQELNSLNYFVRISATKLIGDILGTRQPNMNYVTAYNETYKAWLTKVA
DSNSKVRISWVKTVAKIFNNSQNDIISNDICNGVCKTLMDVDIRVRLAAVQIFDKISVEI
IWLYMKTSLVFQELFHFTRDKNQDIRETVLAFLSSFYQTTMTKHYNVSINNQELVEITNK
IPTVLLNLYYINDKIINQIVDKYLLEKIIPYNEESAKKRVDRLLLVTSHLDKKALASFYA
FNRRQIELSLVVTKFVEFSELANGLANDENVPVVEGEDVSNGLNQIIKWLSDSLSNSFST
QDILKLFVSMKNKKLYCLLKTIVSSDSPYHTVLSCLVEFSNKLKDARIFDKVKLGSTFTR
ADFAQIFKLLAYRSAPIYYNISNVEELLKRSDSKHIIDNITEVNPSLFKDQIETLQNTIK
QYGLDEKALTTDAVDTLKTIYRIGKAHRHYLETKDTFFIDRLKDFSISGLPYEAKYATKI
LGLLDGSEKILQSILDSILPLKKGGGAALILTASEIYKLRPELLKESTTDIVTFVLSNIL
LANEITSDDENDTWIADEFLNKTENNIIASKVFSLELLKNSLIAISNDLSTDQIIKEAFI
NKTLKLFIFLVATGGELINESNKEFYPTPVEFQRKLRCVAGIQLLKLAKVHELNKFIGSE
SVEKLVNLMEDESLQVRETFITYLKKYISEEKISIKFLPLIFFVAFEPDKTLKHDTRIWI
QFMCRKEIFKRNTFFERGFPRLIHYIAHHPDVSDGLDEGNERIVKLKNALEYLVFFFDNI
LTKENISLLYYLAGRIKQYTDKVQDNKEYIYIISELCQLVLLEIKSLKNWDIPVYSGKLN
LPSDLFSPIEDPDERQEISFKCYLKNDNLEQIIRHKLNQMGFGKLKAKLLTAEKLKPISK
SAIKTTRKYKKKRNVIMDDDDDDDDEDDRYVKKLKPEYPIRKSARPKKDVNYKDSDDDDD
DDDDDE
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatagaaataatcaaaatttgcagttcaacaaagagatcatatcgtctattgac
taccatattccattgcaagaacttattgaaagattaagtgaattacatgatgaattgtcc
aatattgatcaagacactattaatttggtgtctgttgataagtatagaaaggatctttta
gattcaaaacttatagctaataaaagtaatggtgttcaggcatttactgcatgttgctta
agcgatattttgaggatctatgctccagatgctccttacactgataatgaattagctgaa
atttttaaactgtttttccgtcaattaaaatatctctcagatcctgagaacggatatttc
cttcaacaagtttatttgttaaccaaactagtagaagttaggtctattgttttaatcaca
gatttaccaaagtccgccaacttaatttcaaaacttttccaggtcttttatgacccgcaa
agcaaccaaatccctatatcaaaattaagcttggtaggcgatctattgggtgaagtcgtt
tcagaagcagatgtactttcaatggatgtgctaaaattaatctttaacaaattcttaacc
tacgatttgaattctgttccacgggggctaaacgttgctcatgattcttgtttccaattt
actttacacatttgtgaaaaatattcaaatagaatgggcaggcatttaactaaattttac
tcagagattttatacggtcttgcttcaactaacaaagctaataaaaatagtaatcataat
tatagggaggaagaagagggaaacaaagaggatggtattgttaacatcactagcgttaat
gacgaaagttataaaacattgactaacttacatactttggtattgaagctgtggctatat
gttccagaattactaagttccatcaatgggttccttttccaagaattaaactctttgaat
tattttgttcgtatctctgccacaaaattgattggtgacatcttgggtactcgacaaccc
aatatgaactatgtaaccgcttataatgaaacctataaagcatggttaacaaaagttgca
gattccaatagtaaagttagaatttcatgggtgaaaacagttgcgaaaattttcaataat
tcacagaatgatataatttcaaacgatatttgcaatggtgtttgcaaaaccttgatggat
gtcgatataagagtaaggcttgctgccgttcagatctttgataaaatctctgtggaaatc
atatggttatatatgaaaacatcattagtttttcaagaattattccacttcactagagac
aaaaaccaagatattagagaaacagttttagcatttttatccagtttttaccaaactact
atgacgaaacactacaatgtcagcattaataatcaagagttggtggagattaccaataaa
attccaactgttttattgaatttatactatattaatgacaaaataattaaccaaatagtt
gacaagtatctattggaaaaaataattccctacaacgaagaatcagccaagaaaagagtc
gataggttattactggtaacttctcatttggacaaaaaagctttggcttcgttttatgct
tttaacagaagacaaatcgagttgtctttggttgttacaaaatttgtagaattttctgaa
cttgcaaatggtttggccaatgatgaaaatgtaccagttgtagagggggaggacgtttct
aatggattaaaccaaataataaaatggttgagtgattcgctttcaaattcgtttagtaca
caagatattttaaaactgtttgtttccatgaaaaataagaaattatattgtttattaaaa
acaattgtctcttctgatagcccataccatacagtattatcctgtttggtagaattcagc
aataaattaaaagatgcaagaatttttgataaagttaaattgggttctacttttaccaga
gctgattttgcccagatttttaaactgttagcatatcggagcgcacccatatattacaat
atttcaaatgtggaagagcttttaaaacgttctgattcaaaacacataattgacaatatt
acagaagtgaatccgtcattattcaaagaccaaattgaaactttacaaaacactatcaag
cagtacgggttggacgaaaaagcacttactacggatgctgtggatacattgaaaaccatt
tataggatcgggaaggcacatagacactatttggaaaccaaggatacgttttttattgat
agattaaaggacttcagtatcagtggacttccatatgaggctaaatatgccactaaaatt
ttgggtttattagatggctcagaaaagatacttcaaagcatattggattcaatcttgcca
ttgaagaagggcggtggtgcagctttgatactgactgcgtcagaaatttacaagttgcgt
ccggaattactaaaagaaagcacaacagatatagttacatttgttttgtcaaatatttta
ttagctaatgaaataactagtgatgatgaaaacgacacgtggatcgctgatgaattttta
aataaaactgaaaataatataattgcatccaaagttttcagtcttgaattgttgaaaaac
agcttgattgccattagcaatgacttatcgacggatcagataattaaagaggcatttata
aacaagaccttgaagcttttcatatttttggtggcaacaggtggtgaattaattaatgaa
tcaaacaaagaattttatccaacaccagtggaatttcaacgtaaattaagatgtgttgct
ggcatccaactattgaagcttgccaaagtacatgaattaaacaagtttattggttcagaa
agcgttgagaaattagttaatttgatggaagacgagtccctacaagttcgtgagactttc
ataacttacttgaagaaatacataagtgaagaaaagatttccattaaatttttgccgctg
attttctttgttgcctttgaaccagacaagacattgaaacacgatactagaatatggatt
cagtttatgtgtagaaaagagattttcaaaagaaatacattttttgaaagaggctttcca
agattaattcattacatagcacatcatcctgatgtttctgatggcctggatgagggcaat
gaaaggattgttaagctaaaaaatgctttggaatacctggttttctttttcgataacata
ttgactaaggaaaatatttctttgttgtactatttagctggtagaattaagcaatacact
gacaaagtgcaagacaataaggaatatatatatattatttctgaattatgccaacttgtg
ctattggaaattaaatcattgaaaaactgggatattccggtatattccggaaaattgaat
ttgccgtcagatttgttttctcctattgaagatcctgacgaaaggcaagagatatccttt
aaatgttacttaaaaaatgataatttagaacaaattattagacataaattaaaccaaatg
gggtttggtaagctaaaggcgaaattgttgacagcggaaaagttaaaacctatatctaaa
agcgcaattaaaactacaagaaaatataagaaaaaacgtaacgttataatggatgatgat
gatgatgatgatgatgaggatgatcgttatgtgaaaaagttaaaaccagaatacccaata
agaaaaagtgctagacccaagaaagatgttaactacaaagattcagatgatgatgatgat
gatgatgatgatgatgaataa
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