Streptomyces luomodiensis: PS467_02040
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Entry
PS467_02040 CDS
T10277
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sluo Streptomyces luomodiensis
Pathway
sluo00040
Pentose and glucuronate interconversions
sluo01100
Metabolic pathways
sluo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sluo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PS467_02040
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PS467_02040
Enzymes [BR:
sluo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PS467_02040
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C_2
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
WNE94187
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Position
469025..470566
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AA seq
513 aa
AA seq
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MRRLVALRLYAALFVAALTGAAAAFLSMPAASAATGSATGYATQNGGTTGGAGGQTVRAT
TGTEIHAALCDRASSSTPITIEVQGTINHGNTEKVSGDSCNTAAGVIELKQISNVTLVGV
GNGAVFDQLGIHVRESSNIIIQNVTVRNVKKSGSPTSNGGDAIGMESDVRNVWVDHVTLE
ASGGEDEGYDGLIDMKNNTQYVTLSYSILRNSGRGGLIGSSESDLSNGFVTFHHNRYENI
DSRTPLLRGGTAHVYNNHYVSLNESGINSRAGAKAKVDNNYFEDSKDVLGTFYTDAAGYW
QVSGNVFDNVTWSSPGDENNPAGPDPKSNTTVSIPYSYTLDRADCVPDIVSRTAGANTGL
RVSDGNCTPQSPDPTEPTPEPTDPTPGPTEPGGTNLSIGAGADGSSKASGTSYGNVRDGD
VSTYWSPAASTGSISIKWGSATTVSKINIVETSASAGRIGPWRVVNADTGAVLTSGSGAG
VITFPQTSLRKITFEITGSSGTPQIAEYETYAG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgagacgattagtcgcgctgcggctctacgcagcgctgttcgtggcggcccttacgggc
gcggccgccgcgttcctgtcgatgcccgcggcgtccgcggcgacgggcagcgccaccggc
tatgcgacccagaacggggggaccaccggcggggcgggcggccagacggtccgggccacc
acgggaaccgagatccacgcggccctgtgcgaccgggccagcagcagcaccccgatcacc
atcgaggtccaggggaccatcaatcacggcaacaccgagaaggtgtcgggcgacagttgc
aacacggccgccggggtgatcgagctcaagcagatcagcaacgtcacgctcgtcggggtc
ggcaacggggccgtcttcgaccaactgggcatccacgtccgcgaatccagcaacatcatc
atccagaacgtgacggtccggaacgtgaagaagtccggctcgcccacgtccaacggcggc
gacgcgatcggcatggagagcgacgtccgcaacgtctgggtcgaccacgtcacgctggag
gcgtcgggcggggaggacgagggatacgacggcctgatcgacatgaagaacaacacccag
tacgtgaccctgtcctacagcatcctgcgcaactccggccgtggcggcctcatcgggtcc
agcgagagcgacctctccaacggcttcgtcaccttccaccacaaccggtacgagaacatc
gactcccgtacgcccctgctgcgcggcggcacggcccacgtctacaacaaccactacgtg
agcctcaacgagtccggcatcaactcccgcgccggcgccaaggccaaggtggacaacaac
tacttcgaggactccaaggacgtcctgggcaccttctacaccgacgcggccggctactgg
caggtcagcggcaacgtcttcgacaatgtgacctggtccagccccggtgacgagaacaac
ccggccggtcccgacccgaagtccaacaccacggtcagcatcccctactcctacaccctc
gaccgggccgactgcgtaccggacatcgtgagccggacggcaggggccaacacggggctg
cgggtgtcggacggcaactgcacaccgcagagccccgacccgaccgagcccacaccggaa
cccaccgatcccacacccggaccgaccgagcccggcgggaccaacctcagcatcggagcc
ggcgccgacggctccagcaaggccagcggtacgagctacgggaatgtgcgcgacggtgat
gtgagcacgtactggtcgccggccgcctcgaccgggtccatctcgatcaagtggggctcc
gccaccaccgtgtccaagatcaacattgtggagacatcggcctccgcgggccgcatcggg
ccctggcgagtcgtcaacgccgacaccggcgccgtcctgacctccggcagcggagcgggt
gtcatcaccttcccccagacctcgctccgcaagatcacctttgagatcaccggctcctcc
ggcacaccgcagatcgccgagtacgagacgtacgccgggtag
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