Streptomyces luomodiensis: PS467_09685
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Entry
PS467_09685 CDS
T10277
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
sluo Streptomyces luomodiensis
Brite
KEGG Orthology (KO) [BR:
sluo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sluo03019
]
PS467_09685
Enzymes [BR:
sluo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PS467_09685
Messenger RNA biogenesis [BR:
sluo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PS467_09685
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WNE95584
UniProt:
A0ABY9USS1
LinkDB
All DBs
Position
complement(2278283..2281105)
Genome browser
AA seq
940 aa
AA seq
DB search
MTDELSPAERYAASRVRAAEQATALAPFREMYDFELDPFQIEACKALEAGKGVLVAAPTG
SGKTIVGEFAVHLALTQGRKCFYTTPIKALSNQKYTDLVKRYGADRVGLLTGDNSVNSDA
PVVVMTTEVLRNMLYAGSQSLLGLGHVVMDEVHYLSDRFRGAVWEEVIIHLPESVTLVSL
SATVSNAEEFGDWLDTVRGDTEVIVSEHRPVPLWQHVLAGRRMYDLFEEKSGRDGDQGGR
REVNPDLVRLARMENSRPSFGRDKRRGRTMREADRERERRQRSRIWTPGRPEVIDRLDAE
GLLPAITFIFSRAGCEAAVQQCLHAGLRLNDEAARRQVRALVEERTAGIPDEDLHVLGYF
EFLEGLERGIAAHHAGMLPTFKEVVEELFVRGLVKAVFATETLALGINMPARSVVLEKLV
KWNGEQHVDITPGEYTQLTGRAGRRGIDVEGHAVVLWQRAMDPAALAGLAGTRTYPLRSS
FKPSYNMAVNLVSQFGRHRSRELLETSFAQFQADKAVVGISRQVQRNEEGLAGYRESMTC
HLGDFDEYARLRRELKDRETELARQGAAQRRAAAAVALEKLRPGDVIHVPTGKFAGLALV
LDPGLSAGRVGGHRGMEYHDGPRPLVLTAERQVKRLAAIDFPVPVEPLDRMRIPKSFNPR
SPQSRRDLASALRTKAGHHEVRRHRKERSPAADDAEISRLRRAIRAHPCHGCADREDHAR
WGERYHRLLRDTRQLERRIEGRTNTIARTFDRICSLLTELDYLRGDEVTDEGKRLARLYG
ELDLLASECLRESVWEGLAPAELAACASALVYEARSADDALPPKLPAGRAKDALGEMVRI
WGRLDALEEDHRINQTEGVGQREPDLGFAWAAYRWASGHGLDEVLREIDMPAGDFVRWTK
QLIDVLGQIAAAAPEGTVARNARRAVDGLLRGVVAYSSVG
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagctatctcccgccgagcgctatgcggcgtcccgcgtccgggccgccgag
caggccaccgcgctggcccccttccgcgagatgtacgacttcgagctggatcccttccag
atcgaggcgtgcaaggccctggaggccggcaagggcgtgctggtggccgctcccaccggc
tccggcaagaccatcgtgggcgagttcgccgtccacctggcgctgacccagggccgcaag
tgcttctacaccacgcccatcaaggcgctgtccaaccagaagtacaccgacctggtgaag
cgctacggcgccgaccgggtcggcctgctcaccggggacaacagcgtcaattccgatgcc
ccggtggtcgtcatgaccaccgaggtgctgcggaacatgctctatgccggctcccagtca
ctgctcggcctcggccatgtcgtgatggacgaggtccactacctctccgaccggttccgc
ggcgccgtctgggaggaggtcatcatccacctccccgagtcggtgacgctggtgtcactc
tccgcgaccgtctccaatgccgaggagttcggcgactggctcgacaccgtccgcggcgac
accgaggtcatcgtctccgagcaccgcccggtgccgctgtggcagcacgtcctcgccggg
cgccggatgtacgacctgttcgaggagaagagcggccgcgacggcgaccagggcggacgc
cgcgaggtcaaccccgatctggtccggctggcccggatggagaacagccgccccagcttc
ggccgcgacaagcgccgcggccgcaccatgcgggaggccgaccgggagcgcgagcgccgt
cagcgcagccggatctggacccccggccggcccgaggtcatcgaccggctcgacgccgag
gggctgcttccggccatcaccttcatcttcagccgggccggctgcgaagccgccgtccag
cagtgtctccacgcggggctgcggctcaacgacgaggcggcgcgccgccaggtgcgggcc
ctcgtcgaggagcgcacggccggcatccccgacgaagacctccatgtgctggggtacttc
gaattcctggagggcctggagcggggcatcgcggcccaccacgccggaatgctccccacc
ttcaaggaagtcgtcgaggagctcttcgtccgcggcctggtcaaggcggtgttcgccacc
gagaccctcgcgctcggcatcaacatgcccgcccgctcggtggtgttggagaagctcgtc
aagtggaacggcgagcagcacgtcgacatcacccccggtgagtacacccagttgaccggc
cgggccgggcggcgcggtatcgatgtcgagggccatgcggtggtgttgtggcagcgcgcc
atggaccccgccgcgctcgccgggctggccggcacccggacgtatccgctgcgctcctcc
ttcaaaccgtcgtacaacatggcggtcaacctcgtctcccagttcggccggcaccgctcg
cgcgagctgctggaaacctccttcgcgcagttccaggccgacaaggcggtcgtcgggatc
tcccggcaggtgcagcgcaacgaggaggggctggccggctaccgcgaatccatgacctgc
catctcggcgacttcgacgagtacgcgcggctgcgccgcgagctcaaggaccgcgagacc
gagctggcccggcagggcgcggcccagcggcgcgcggccgccgcggtcgccctggagaag
ctccgccccggcgatgtcatccatgtgcccaccggcaagttcgccggcctcgcgctggtg
ctggaccccgggctgtccgccgggcgggtgggcggccaccgcggcatggagtaccacgac
gggccgcggcccctggtgctcaccgccgagcggcaggtcaagcggctggcggcgatcgac
ttcccggtcccggtcgagccgctggaccggatgcgcatccccaagtcgttcaatccgcgc
agcccgcagtcccgccgcgacctggcctccgcgctgcgcaccaaggccggtcaccacgag
gtgcggcgccaccgcaaggagcgctcgcccgcggccgacgacgccgagatcagccggctg
cgccgggccatccgcgcccacccctgccacggctgtgccgaccgcgaggaccacgcccgc
tggggcgagcgctaccaccggctgctgcgcgacacccggcagctggagcggcgcatcgag
ggccgtacgaacaccatcgcccgcaccttcgaccggatctgctccctgctgaccgagctg
gactatctgcgcggcgacgaggtcacggacgagggcaagcggctggcgcggctgtacggc
gagctggacctgctggccagcgagtgcctgcgggagagcgtctgggaggggctggccccc
gcggagctcgcggcctgtgcctccgcgctcgtctacgaggcgcggtcggccgatgacgcg
ctgccgcccaagctgcccgccggccgggccaaggacgcgctcggcgagatggtccgcatc
tgggggcggctggacgccctggaggaggatcaccggatcaaccagacggagggcgtcggc
cagcgtgagccggatctggggttcgcctgggccgcctaccgctgggcttccggacacggg
ctcgatgaggtgctgcgggaaatcgacatgcccgccggtgacttcgtgcgctggaccaag
caactgatcgatgtgctcggccagatcgccgcggcggccccggagggcacggtggcacgc
aacgcccgccgtgcggtggacgggctgctgcgcggggtcgtggcgtactcctcggtcggc
tga
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