Streptomyces luomodiensis: PS467_11030
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Entry
PS467_11030 CDS
T10277
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sluo Streptomyces luomodiensis
Pathway
sluo03030
DNA replication
sluo03430
Mismatch repair
sluo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sluo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PS467_11030
03430 Mismatch repair
PS467_11030
03440 Homologous recombination
PS467_11030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sluo03032
]
PS467_11030
03400 DNA repair and recombination proteins [BR:
sluo03400
]
PS467_11030
Enzymes [BR:
sluo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PS467_11030
DNA replication proteins [BR:
sluo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PS467_11030
DNA repair and recombination proteins [BR:
sluo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PS467_11030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
PTCB-BRCT
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WNE95825
UniProt:
A0ABY9UTE6
LinkDB
All DBs
Position
2569742..2570728
Genome browser
AA seq
328 aa
AA seq
DB search
MLEDPTATAPHPVPPSAWPASYPQGYAVVDVETTGLARDDRIVSAAVYQLDARGAVQDHW
YTLVNPQRDPGPVWIHGLTAEMLADAPRFPEIAGELSERLADRVLVAHNAAFDWSMLARE
YARTKSTAPVRQRLCTIALSKELGLPLPNHKLETLAAHYGVVQRRAHHALDDARVLAEAF
RPSLLRAAATGLRLPLLACQPLTEWSDGPAIGHQRSYRQTWRPSRKRPACPYPNPGRYEP
GGQLVQGMRVAFSGDTSVDRELLEDRAIEAGLHVATSVSRLTSVLVTNDPESPTSKTAKA
RSFGTPIIDEAAFMQLLQDVTPAPPTNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacccgacggcaaccgcaccgcaccccgtcccgccgtccgcatggccggcc
agctatccgcaggggtacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgac
cggatcgtctccgcggcggtctatcagctcgacgcccggggcgcggtgcaggaccactgg
tacaccctggtcaacccgcagcgcgatccgggcccggtgtggatccacggcctcaccgcg
gagatgctcgccgacgccccgcgcttccccgagatcgccggggagctctccgagcgcctc
gccgaccgcgtcctggtcgcgcacaacgccgccttcgactggtcgatgctcgctcgtgag
tacgcccgcaccaagagcaccgcgcccgtgcggcagcggctgtgcaccatcgccctctcc
aaggagctgggcctgcccctgcccaaccacaagctggagaccctcgccgcgcactacggc
gtggtccagcggcgcgcccaccacgccctggacgacgcgcgggtgctcgccgaggcgttc
cggcccagcctcctccgggccgccgcgaccgggctgcgcctgccgctgctggcctgccag
ccgctcaccgagtggtccgacggcccggcgatcggccaccagcggtcgtaccggcagacc
tggcgccccagccgcaagcgccccgcctgcccctatcccaaccccgggcgctacgagccg
ggcgggcagctggtccagggcatgcgggtggcgttctccggggacacctcggtcgaccgc
gagctgctggaggaccgggcgatcgaggccgggctgcacgtggccaccagcgtctcccgg
ctcaccagcgtgctggtcaccaatgaccccgagtcgcccacgtccaagaccgccaaggcc
cgctccttcggcacgcccatcatcgacgaggcggccttcatgcagctcctccaggacgtc
acccccgcgccgccgacaaacaggtga
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