Streptomyces luomodiensis: PS467_30260
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Entry
PS467_30260 CDS
T10277
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sluo Streptomyces luomodiensis
Pathway
sluo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sluo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PS467_30260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sluo03021
]
PS467_30260
Transcription machinery [BR:
sluo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PS467_30260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HC2
FAM199X
CDC27
Motif
Other DBs
NCBI-ProteinID:
WNE99312
UniProt:
A0ABY9V379
LinkDB
All DBs
Position
7160689..7162248
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AA seq
519 aa
AA seq
DB search
MSASTSRTLPPEIAESESVMALIERGKAEGQIAGDDVRRAFEADQIPPTQWKNVLRSLNQ
ILDEEGVTLMVSAAEAPKRTRKSVAAKSPAKRTATKTVAAKTVTTKKAPAAPAAPSADAG
GASVGEAAAPAKKAAAKKATAKKTAAKKATAAKKTVAKKTTAKKDVTDELLEAEDVIEEA
PGKPGPEGAEGEPENAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQ
EVELAKRIEAGLFAEDKLANSDKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKR
YTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIP
VHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGE
DGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTL
DEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtcggagtctgtcatg
gcgctcatcgaacggggaaaggctgaggggcagatcgccggcgacgatgtgcgccgggcc
ttcgaggctgaccagattccgccaacccagtggaagaacgtactgcgcagcctcaaccag
atcctcgacgaggagggtgtgacgctgatggtcagtgccgcagaggcgcccaagcgcacc
cgcaagagcgtcgcagcgaagagcccggcaaagcgcaccgccaccaagaccgtcgcggcc
aagacggtcaccaccaagaaggcccccgccgccccggccgctccctcggcggacgccggc
ggtgcctcggtcggtgaggccgcggcccccgcgaagaaggccgccgccaagaaggccacg
gccaagaagacggccgccaagaaggccaccgcagccaagaagacggtcgcgaagaagacc
accgccaagaaggacgtcaccgacgagctcctcgaggccgaggacgtcatcgaggaggca
ccgggcaagccgggccccgagggtgccgagggcgagccggagaacgccggcttcgtgctg
tccgacgaggacgaggacgacgcccccgcgcagcaggtcgccgccgccggcgccacggcc
gacccggtcaaggactacctcaagcagatcggcaaggtcccgctgctcaacgccgagcag
gaggtcgagctcgccaagcgcatcgaggccggtctgttcgccgaggacaagctcgccaac
tccgacaagctcgcccccaagctcaagcgcgagctggagatcatcgccgaggacggccgc
cgcgccaagaaccacctcctggaggccaacctccgtctggtggtctccctggccaagcgc
tacacgggccgcggcatgctcttcctggacctcatccaggagggcaacctcggtctgatc
cgcgccgtcgagaagttcgactacaccaagggctacaagttctccacgtacgccacctgg
tggatccgccaggcgatcacccgggccatggccgaccaggcccgcaccatccgtatcccg
gtgcacatggtcgaggtcatcaacaagctcgcgcgtgtccagcgccagatgctccaggat
ctgggccgtgagcccactccggaggagctggccaaggagctcgacatgacccccgagaag
gtcatcgaggtccagaagtacggccgtgagccgatctcgctgcacaccccgctgggcgag
gacggcgacagcgagttcggtgacctcatcgaggactccgaggccgtcgtcccggccgac
gcggtcagcttcaccctgctccaggagcagctgcactccgtgctcgacacgctcagcgag
cgcgaggcgggcgtggtctcgatgcgcttcggcctcaccgacggccagccgaagaccctc
gacgagatcggcaaggtctacggcgtgacgcgtgagcgcatccgccagatcgagtccaag
acgatgtcgaagctgcgccacccgtcccgttcccaggtcctccgggactacctggactga
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