Sphingomonas lutea: H9L13_01850
Help
Entry
H9L13_01850 CDS
T06880
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
slut
Sphingomonas lutea
Pathway
slut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L13_01850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slut03019
]
H9L13_01850
Enzymes [BR:
slut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L13_01850
Messenger RNA biogenesis [BR:
slut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L13_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
ERCC3_RAD25_C
HEM4
AAA_22
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
QNN67712
UniProt:
A0A7G9SIN7
LinkDB
All DBs
Position
352587..354110
Genome browser
AA seq
507 aa
AA seq
DB search
MSFHTLGLSKPLLDALAAKNYSQATPIQHQAIPTVLSGRDLLGIAQTGTGKTAAFMLPSL
DRLAAERQIPKPGQIRMLVLAPTRELASQIAASAETYGRFMRLSVGVIFGGVPNGKSVRT
VARGLDVLVATPGRLLDLIDQRALSLRELEILVLDEADQMLDLGFIHALKRIVALVPPKR
QTLFFSATMPKAIKELADKYLTNPAEVAVTPVAKTADRVAQRVVMVNQAEKTALLTMFLQ
SEKTERVLVFSRTKHGADKIVRMLEAAGLSANAIHGNKSQAQREKALALFRSGEVPVLIA
TDIAARGIDIPGVSHVINYDLPEVPEQYVHRIGRTARAGAEGQAAAFCAPDERGLLRDIE
RLTRQRIEVAALPADFTVKVEELKRLKLAPKAPERSARPNFKSDRRHDGQRREQRNDRQR
HPHRADGHAAHRSGAQDRNGQRRDGQRNDAVRSPYRPEAHREVDAAPAPARTNPGHGHSR
PAGAHPRPEGGQPKRKFRRGGPRRAQG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcacaccctcgggctgtccaagcccctgctcgacgcgcttgccgcgaaaaat
tattcgcaggcgacgccgatccagcatcaggcgatcccgaccgttttgagcggccgcgac
ctgctcggcattgcccagaccgggaccggaaagacggcggccttcatgctgccttcgctc
gatcgcctcgcggccgagcgccagatccccaagccgggccagatccgcatgctggtgctt
gcgccgacgcgcgagctcgcttctcagatcgccgccagcgccgagacctacggccgcttc
atgcggctatcggtcggcgtcattttcggcggcgtgcccaacggcaagagcgtgcgcacc
gttgcgcgcggcctcgacgtgcttgtcgcgacgccgggccgcctgctcgacctgatcgat
cagcgtgccttgagcttgcgcgagcttgaaatcctcgtcctcgacgaggccgaccagatg
ctcgacctgggcttcattcatgcgctcaagcgcatcgtcgccctcgtcccgcccaagcgc
cagactttgttcttctcggccaccatgcccaaggcgatcaaggaactggccgacaaatat
ctgaccaaccccgccgaggttgcggtgacgccggtggccaagaccgccgaccgcgtcgcg
cagcgcgtggtgatggtcaaccaggcggaaaagaccgcgcttctgaccatgttcctgcag
tcggagaagaccgagcgcgtgctggtcttcagccgcaccaagcatggcgccgacaagatc
gtgcgcatgctcgaagcggctggtctttcggccaatgcgattcacggcaacaaaagccag
gcgcagcgcgaaaaggcgctggcgctgttccgctcgggcgaagtgccggtgctgatcgcg
accgacatcgccgcgcgcgggatcgacattccgggcgtcagccacgtcatcaattacgac
ctgcccgaagtgccggagcaatatgttcaccgcatcggccgcaccgcgcgtgccggggcg
gaagggcaggcggcggcgttctgcgcgcccgatgagcgcggcttgctgcgcgacatcgag
cggctgacccgccagcgcatcgaggttgccgcgctgccggccgacttcacggtgaaggtc
gaggagctcaagcgcctcaagctcgcgcccaaggcgccagagcggtcggcgcgcccgaac
ttcaagtccgatcgccgtcacgacggccagcgccgagagcagcgcaacgaccgccagcgt
catccgcatcgtgccgacggccacgctgcgcatcggtcgggcgcgcaggaccgcaacggc
cagcgccgcgacggtcaacgcaacgacgccgtgcgctcgccgtaccgtccggaggcgcat
cgcgaggtcgatgccgcgccggcgccggcgcgcaccaaccccggccacggtcattcgcgg
cccgcgggcgcccacccgcgccccgagggcggccagcccaagcgcaagttccgccgtggc
gggccgcgccgggcgcagggctag
DBGET
integrated database retrieval system
