KEGG   Sphingomonas lutea: H9L13_03240
Entry
H9L13_03240       CDS       T06880                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
slut  Sphingomonas lutea
Brite
KEGG Orthology (KO) [BR:slut00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slut03400]
    H9L13_03240
Enzymes [BR:slut01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     H9L13_03240
    5.6.2.6  RNA 3'-5' helicase
     H9L13_03240
DNA repair and recombination proteins [BR:slut03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    H9L13_03240
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QNN68503
UniProt: A0A7G9SKX8
LinkDB
Position
complement(624119..626527)
AA seq 802 aa
MSGLPAAVESWFDARGWQPRRHQLDMLELARRGRSGLLVAATGAGKTLAGFLPTICDLAE
RPSEGLHTLYVSPLKALAVDVQRNLIGPIEEMALPIRVETRTGDTPSDRKARQRARPPQI
LLTTPESLSLLLSYPDSATLFENLTTIVVDEIHAFAKEKRGDLLSLSLSRLQALRPELRR
VGLSATISDPDAYRSWLAPDADIDAVDLVTGEPGADPDLSILIPENRIPWGGHSGRHAAR
EVMRLIERHRTTLVFCNTRSLAELIFQELWTANDDALPIGVHHGSLSLEARRKVEAAMAA
GKLRALVCTASLDLGIDWGDVDLVVQMGAPKGSSRLLQRIGRANHRLDEPSRGMIVPGNR
FEYLEARAALDAVEARELDPEIFRPGTLDVLAQHILGVACAGPFDEKVLLDEVRGAAPYA
ALTEEVWRRVLDYIATGGYSLRAYDKFKRLTEFAPGQWRVTKPAVVAQHRLNAGVIVDNP
MMDVRFLNGRTLGRVEEGFGSTLSVGDHIFFAGLSLEVTRFQDTDIVVRASSKQARLVTY
GGQRMSMSTHLADRVRAFLADNRDWHRFPDDVREWLEIQAKRSILPQPDHLLVETFPFEG
RHYMVAYSFEGWNAHQSLGMLITRRMETAGLKPLGFVANDYGLAAYSLEPVTDPRPLFSA
DILEHEFVEWVEQSHLLKRAFREVAVIGGLVERQHPGKRKSGKQVSFSTDLIYDVLRKYE
PEHLLLRAAWDDARGRMTELGRLARLVERAEATMVHVSAERVTPLAIPLMVVIGREALPP
GAAADESLLLQAEALAQEAMTV
NT seq 2409 nt   +upstreamnt  +downstreamnt
ctgagcggccttcccgccgccgttgaaagctggttcgacgcccggggctggcaaccgcgc
cggcaccagctggacatgctcgagcttgcgcggcgcggacgcagcggcttgctcgtcgcc
gcgaccggcgcgggcaagaccctcgccggcttcctgccgacgatctgcgaccttgccgaa
cgaccgagcgagggcctgcacacgctctacgtctcgccgctgaaagcactggcagtcgac
gtccagcgcaacctcatcggcccgatcgaggagatggcgcttccgatccgggtcgaaacg
cgaaccggcgacacaccgtccgaccgcaaggcgcgccagcgcgcgcgcccgccgcaaatc
ctgctgaccacccccgaatcgctcagcctgctgcttagctaccccgacagcgcgaccttg
ttcgagaatttgacgaccatcgtcgtcgatgaaatccacgccttcgccaaggaaaagcgc
ggcgacctgctcagcctgtcgctgtcacggcttcaggcgcttcggccggagctgcggcgg
gttggcctgagcgcgaccatttcagaccccgatgcctaccgcagctggctcgcgcccgac
gcggacatcgacgccgtggatttggtgaccggggagccgggagcagaccccgatttgtcg
atcctcattcccgaaaacaggattccgtggggtgggcacagcggccgccacgccgcgcgc
gaggtgatgcggctgatcgaacggcaccgcaccaccctcgtcttctgcaacacgcgtagc
ctggccgaactcatcttccaggaattgtggaccgccaacgacgatgctctgccgattggc
gtccatcacggcagcctgtcgctcgaagcgcggcgcaaggtcgaagcggcgatggccgca
ggcaagctgcgtgcgcttgtctgcaccgctagcctcgaccttggcatcgattggggggac
gtcgacctcgtggtccagatgggcgcgcccaagggcagttcgcgcctgctccagcgcatc
ggccgcgccaaccaccgcctcgacgagcccagccgcggcatgatcgtgcccggcaaccgc
ttcgaatatctcgaagctcgcgccgcgctcgacgcggtcgaggcgcgcgagctcgatccg
gaaatattccgcccgggcacgctcgatgtcctcgcccagcacatccttggcgtcgcctgc
gcggggccgttcgatgagaaggtgctgctcgatgaggtacgcggggcggcaccttatgcc
gccctgacggaggaggtctggcgccgcgtcctcgattacatcgcgaccggcggatacagc
ttgcgcgcctacgacaagttcaaacgcctgaccgaatttgcgcccggccagtggcgcgtg
acgaagcccgccgtggtcgcccagcaccggctcaacgccggcgtgatcgtcgacaatccg
atgatggacgtgcgtttcctcaacggccgcacgctcggccgggtcgaggagggtttcggc
tcgaccctgtcggtcggcgatcacattttcttcgcgggcctgagcctggaagtgacgcgc
tttcaggacaccgacatcgtcgtgcgcgcctcgtccaagcaggcgcggctggtgacctac
ggcgggcagcggatgagcatgtcgacgcaccttgccgaccgcgtgcgcgccttccttgcc
gacaaccgcgactggcatcgcttccccgacgacgtccgcgaatggctcgagatccaggcc
aagcgctcgatccttccccagcccgatcacttgctggtcgaaacctttccgttcgagggc
cgccactacatggtcgcctacagcttcgaaggctggaacgcgcaccagtcgctcggcatg
ctgattacgcggcggatggagactgcggggctcaagccgctcggcttcgtcgccaacgat
tatggcctcgccgcctacagcctcgaaccggtgaccgacccgcgcccgcttttctcggcc
gacatcctcgaacatgaattcgtcgagtgggtcgagcaatcgcacctgctcaagcgcgcc
ttccgcgaggtagccgtgatcggcgggctggtcgagcgccagcacccgggcaagcgcaag
agcggcaagcaggtcagcttctcgaccgacctgatctacgacgtcctgcgaaaatatgag
cccgagcatctgctgctgcgcgccgcgtgggacgatgcgcgcgggcgcatgaccgagctc
gggcgcctggcgcggttggtcgagcgcgccgaggcgacgatggtccatgtcagcgccgaa
cgcgtgaccccgctcgcgatccctttgatggtcgtgatcgggcgcgaagccctgccgccg
ggcgccgcggcggacgaatcactgctgctccaggccgaagccctcgcgcaggaagccatg
acggtctag

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