Sphingomonas lutea: H9L13_05560
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Entry
H9L13_05560 CDS
T06880
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
slut
Sphingomonas lutea
Pathway
slut03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H9L13_05560 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slut03400
]
H9L13_05560 (uvrA)
DNA repair and recombination proteins [BR:
slut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H9L13_05560 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H9L13_05560 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_21
DnaJ_CXXCXGXG
AAA_25
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QNN68330
UniProt:
A0A7G9SKF5
LinkDB
All DBs
Position
complement(1081543..1084620)
Genome browser
AA seq
1025 aa
AA seq
DB search
MLTHISVRGAREHNLKGVDVDIPRESLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVPY
SPATGLPIEAQQVSQMVDRVMALPEGSRHYLLAPVVRGRKGEYRKELAEWQKAGFTRVRI
DGVFYEIDEAPALDKKYKHDIEVVVDRIVVREGIEPRLADSFETALKLAEGLAYLDPADP
PSDAILVRPERSEAQSKGAGTDALRLRSGRTEAAEKSGMKLDYAPANRIVFSEKFACPVS
GFTIAEIEPRLFSFNAPQGACPACDGLGEKLIFDEDLVVPNHALSIAKGAVVPWAKSNPP
SPYYMQVLASLARAYGFDLHVPWADLPEEARRVILHGTGGKAVTLRFIDGKRSYEVKKAF
EGVIGNLNRRMLQTESAWMREELSRYQSSRPCETCHGARLRPEPLAVKIAGEDISLSSRR
SVADALAWFTALHTKLTPTQNEIAHVILKEINERLGFLHNVGLDYLHLDRTSGTLSGGES
QRIRLASQIGSGLSGVLYVLDEPSIGLHQKDNDRLLETLKRLKSLGNTVLVVEHDEDAIR
HADHVIDMGPGAGVHGGTVVCQGTLDELLACDTSITADYLSGRREIPLRETRRKGTGKFL
TVTGATANNLRNVTAKFPLGTFTCVTGVSGSGKSSLTIDTLYAGTARALNGARIPCGPCE
GIKGLEQLDKVIDIDQSPIGRTPRSNPATYTGAFTQIRDWFAQLPEAKARGYKPGRFSFN
VKGGRCEACQGDGLLKIEMHFLPDVYVTCDVCHGQRYNRETLEVKFKGHSIADVLDMNVE
EAADLFKAVPGIRDKMRMLQEVGLGYIKVGQQATTLSGGEAQRVKLSKELSRRATGKTLY
ILDEPTTGLHFEDVRKLLEVLHRLVETGNTVVVIEHNLDVIKTADHVIDLGPGGGVNGGE
IVVTGTPEEVAAEAKSFTGQYLAPLLARASLKPKVVATKPRKPARSSRAKSRDLIDEEPN
LIGAN
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgctgactcatatttctgtgcgaggtgcgcgcgagcacaacctcaagggcgtcgacgtc
gatatcccgcgtgaaagcctgacggtgatcaccgggcttagcggctcgggcaagtcgagc
cttgccttcgacaccatctatgccgaggggcagcgccgctacgtcgaaagcctgagcgcc
tatgcgcgccagtttctcgagatgatgcagaagcccgatgtcgagcatatcgacggcctc
tcgcccgccatttcgatcgagcagaagaccaccagccgcaacccgcgctcgaccgtcgcc
acggtcaccgagatctacgattacatgcgcttgctgtgggcgcgcgtcggcgtgccctat
tcgcccgcgaccggcctaccgatcgaggcgcagcaggtcagccagatggtcgaccgcgtc
atggccctgcccgaaggcagccgccactacctcctcgcccccgtcgtccgcggccgcaag
ggcgagtatcgcaaggagctcgccgaatggcagaaagcgggcttcacccgcgtccgcatc
gacggcgtcttctacgagatcgacgaagcacccgcgctcgacaagaagtacaagcatgac
atcgaagtcgtggtcgaccgcatcgtcgtccgcgaaggcatcgagccgcggctggcggat
tcgttcgagactgcgctcaagctggcggaaggcttggcgtatctggacccggcagatccg
cccagcgacgccatcctcgttcgtcctgagcggagcgaagcgcagtcgaagggcgctggc
acggacgcccttcgacttcgctcaggacgaacggaggctgccgaaaagtcgggcatgaag
ctcgactacgcccccgccaaccgcatcgtcttctccgaaaagttcgcctgccccgtctcc
ggcttcaccatcgccgagatcgaaccccgcctcttctccttcaacgccccgcagggcgcc
tgccccgcctgcgacggcctcggcgaaaagctcatcttcgacgaggatctcgtcgtcccc
aaccatgcgctgagcatcgccaagggcgcggtcgtgccgtgggccaagtccaacccgccc
agcccttattacatgcaggtgctcgccagcctcgcgcgcgcctatggcttcgacctccac
gtgccgtgggccgatttgcccgaggaggcgcgccgcgtgatcctccacggcaccggcggc
aaggcggtcaccctgcgcttcatcgacggcaagcgcagctatgaggtcaagaaggcgttc
gaaggcgtcatcggcaacctcaaccgccgcatgctccagaccgaatccgcgtggatgcgc
gaggagctgtcgcgctaccagtcgagccgcccgtgcgagacgtgccacggcgcccgcctc
cgccccgagccgctcgcggtcaaaatcgcgggcgaggacatcagcctctccagccgccgc
agcgtcgccgacgcgctcgcctggttcactgcgctccacaccaagctcacgccgacgcag
aacgaaatcgcgcacgtcatcctgaaggagatcaacgagcgcctcggcttcctccacaat
gtcgggctcgactacctccacctcgaccgcaccagcggcaccttgagcggcggcgagagc
cagcgcatccgcctcgcctcgcagatcggcagcggcctctcgggcgtcctttacgtcctc
gacgaaccctcgatcggcctccaccagaaggacaacgaccgcctgctcgaaacgctcaag
cggttgaagagcctcggcaacaccgtcctcgtggtcgagcatgacgaggacgcgatccgc
cacgccgaccatgtcatcgacatgggccccggcgcgggcgtccacggcggcaccgtcgtc
tgtcagggcacgctcgacgaattgctcgcgtgcgacaccagcatcaccgccgattacctc
agcggccgccgcgaaatcccgctgcgcgaaacccgccgcaagggcaccggcaagttcctc
accgtcaccggcgcgaccgccaacaacctgcgcaacgtcaccgccaaattcccgctcggc
accttcacctgcgtcactggggtcagcggcagcggcaagtcatcgctgaccatcgacacg
ctctacgccggcaccgcgcgcgcgctcaacggcgcgcgcatcccgtgcggcccgtgcgag
ggcatcaaggggctcgaacagctcgacaaggtgatcgacatcgaccagtcgccgatcggc
cgcaccccgcgctccaaccccgcgacctacaccggcgccttcacccagatccgcgactgg
ttcgctcagctgcccgaggccaaggcgcgcggctacaagcccggccgcttcagcttcaac
gtcaagggcggccgctgcgaggcgtgccagggcgacggcctgctcaagatcgagatgcac
ttcctgcccgacgtctacgtcacctgcgacgtgtgccacggccagcgctacaaccgcgag
acgctcgaggtgaagttcaagggccactcgatcgccgacgtgctcgacatgaacgtcgag
gaggcggcggatctgttcaaggcggtccccggcatccgcgacaagatgcgcatgctgcag
gaagtcggcctcggctacatcaaggtcggccagcaagcgaccacgctcagcggcggcgaa
gcccaacgcgtgaagctctcgaaggagctgtcacgtcgcgccaccggcaagaccctctac
atcctcgacgaacccaccacgggcctccatttcgaggacgtccgcaagctgctggaggtg
ctccaccgcctggtcgaaaccggcaacaccgtggtcgtgatcgaacacaacctcgacgtc
atcaagacggcggaccatgtgatcgatctgggcccgggcggcggcgtgaatggcggcgag
atcgtggtgacgggcacgccggaggaagtggcggcggaggctaagagcttcaccgggcag
tatctggcgccgctgctggcgcgagcgagcctcaagccgaaggtggtggcgacgaagccc
cgcaagcccgcccgttcgtcccgagcgaagtcgagggatttgattgacgaagagccgaat
ttgattggggcgaattag
DBGET
integrated database retrieval system
