Sphingomonas lutea: H9L13_08235
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Entry
H9L13_08235 CDS
T06880
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slut
Sphingomonas lutea
Pathway
slut03030
DNA replication
slut03430
Mismatch repair
slut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H9L13_08235 (dnaE)
03430 Mismatch repair
H9L13_08235 (dnaE)
03440 Homologous recombination
H9L13_08235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slut03032
]
H9L13_08235 (dnaE)
03400 DNA repair and recombination proteins [BR:
slut03400
]
H9L13_08235 (dnaE)
Enzymes [BR:
slut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H9L13_08235 (dnaE)
DNA replication proteins [BR:
slut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H9L13_08235 (dnaE)
DNA repair and recombination proteins [BR:
slut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H9L13_08235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
COE1_HLH
Scaffold
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QNN68592
UniProt:
A0A7G9SL67
LinkDB
All DBs
Position
complement(1599801..1603214)
Genome browser
AA seq
1137 aa
AA seq
DB search
MLEGAMEPKTVAERAAALGFPAIALTDRNGLYGAMPFGDACVAKGVQPIIGATLAIARPE
DLGGVGAIDWLILLAKDETGYANLAKLVSAAHLDRPLEQVPHVPLEMLERLSEGLIALTA
GNEGALARLLADGQRAQAEHYLDRLQQMFAGRLYIEIVRRNDPIEDAAEAALIDLAYARD
LPIVATNPAAYADQTFHAAHDAMLCIAHSAYVESAERITSSPDAWLKDGILMGELFADLP
EALANTAVIAKRCAVAAPKRKPILPRLGDDEDEQLRRDAHAGLEARLAGRPMEERAGYAE
RLDFELDVIIGMGFAGYFLIVADFIKWAKANDIPVGPGRGSGAGSVVAWALTITDLDPLA
LGLLFERFLNPERVSMPDFDIDFCETHRDKVIAYVQQKYGRDRVAQIITFGRLKARAVLK
DTGRVLQMSYGHVDRLAKLVPNHPTDPWTLDRALKEVPELRNEYRDARDVKRLFDLAMKL
EGLPRHSSTHAAGVVIGDRPLDELVPLYRDPRSDMPVTQFDMKYVEAAGLVKFDFLGLKT
LSVLQEGKRLLAEQGVEVDFATLPWDDPAVYELLQRGDTVGVFQLESEGMRRTLASVRPT
AFGDIIALVALYRPGPMDNIGMFGDRKNGRATIEYPHPLLEGILAETYGIFVYQEQVMQA
AQILAGYSLGSADLLRRAMGKKIKAEMDAQRASFVEGCGTHNNIPPAKANELFDLIDKFA
GYGFNKSHAAAYALVAYQTAWLKAHHRAEFYAASMSFDTATTDKLALFTEDMRRGGTDCL
RPDINASHAHFTVEDGPEGNSVRYALGALKGVGEKAMDALVEERARKGPFRSLEDFAARV
DPRLLNRRQLESLAGAGAFDSINPNRPVVFTAAETILAHATSAHEQRESGQAALFGGASE
ELAPIRLPRDAAWTLAQRMAAERESFGFYFSAHPVDAHKHLLAAHKVRTFAELGEVRIAE
GERAGACMAALIEDARWRTSARGRRYMMVTASDPSGQFLATAFDDDVCAALEAAARSGAC
GLLSCELDRRAGDEAPRVTIKRIQPLEGLAKSTRLRMTVRLNDAGAAPALGDILAGSRGG
NGSVRIIVSIATGGEAHILAGRDFALDAELALKIERIAGEGNVDLSVQEPPKLALVG
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaggcgcgatggagccaaagaccgtcgccgagcgcgccgctgcgctcggcttt
cccgccatcgcactgaccgaccgcaacggcctttatggtgcaatgccgtttggggacgcc
tgcgttgccaagggagtccagccgatcatcggcgcgaccctcgcgattgcccgccccgag
gacctcggcggcgtcggcgcgatcgactggcttatcctgctggcgaaggacgaaaccggc
tatgccaacctcgccaagctggtctccgcggcccatctcgatcggccgctcgagcaagtg
ccgcatgtcccgctggagatgctggagcgattgtcggaggggctgatcgcgttgaccgcc
ggcaatgaaggtgcgctcgcgcggctgcttgcggatgggcagcgagcgcaggcggagcat
tatctcgaccggctgcagcagatgttcgccggccgcctgtacatcgaaatcgtgcgccgt
aacgatccgatcgaggatgcggccgaggcggccttgatcgacctggcttatgcgcgagac
ctgccgatcgtcgcgaccaacccggcggcctatgcggaccaaaccttccacgccgcgcac
gacgccatgctgtgcatcgcccattcggcctatgtcgaaagtgccgagcgcatcacctct
tcgcctgacgcatggctgaaggatggcatattgatgggcgagttgttcgccgatcttccc
gaggccctcgccaacaccgcggtcatcgccaagcggtgcgcggtcgccgcgcccaagcgc
aagccgatccttccgcggctcggcgatgacgaggacgagcagctgcgccgcgatgcccac
gcgggtctcgaggcgcgcctagccggtcgcccgatggaagagcgcgcgggctatgccgag
cggctcgatttcgagctcgacgtgatcatcggcatgggctttgccggctacttcctgatc
gtcgccgacttcatcaaatgggccaaggccaacgacattcccgtcgggcccggccgcggg
tccggcgcgggctcggtcgtcgcctgggcgctgaccatcaccgacctcgatccgctggcg
ctgggcctgctgttcgaacgcttcctcaaccccgaacgcgtgtcgatgcccgacttcgac
atcgatttctgcgaaacgcatcgcgacaaggtgatcgcttacgtccagcagaaatacggc
cgtgaccgcgtcgcgcagatcatcaccttcgggcgcttgaaggcccgcgcggtgctcaag
gataccggccgcgtgctgcagatgagctatggccacgtcgaccggctcgccaagctcgtc
cccaaccatccgaccgatccgtggacgctcgaccgtgcgctcaaggaagtgcccgagctg
cgcaacgaatatcgcgacgcgcgcgacgtcaaacgcctgttcgacctggccatgaagctg
gagggcctgccgcgccacagctcgacccacgcggcgggggtggtgatcggcgaccgcccg
ctcgacgagctcgtgccgctctaccgcgacccgcgctccgacatgccggtgactcagttc
gacatgaaatatgtcgaggcggccgggctggtgaagttcgacttcctcggtctcaagact
ctgtcggtgctccaggaaggcaagcgcctgctcgccgagcagggggtcgaggtcgatttc
gcgacgctgccctgggacgatccggcggtttatgaattgcttcagcgcggcgacacggtc
ggcgtgttccagctggaatccgaagggatgcggcgcacgcttgcttccgtccgacccact
gcgttcggcgacatcatcgcgctcgttgcgctctaccggccgggcccgatggacaatatc
ggcatgtttggcgaccgtaagaatgggcgtgcgacgatcgaatatccgcaccccttactc
gaaggcattttggccgaaacctacggcatcttcgtctatcaagaacaggtgatgcaggcg
gcgcagatcctcgccggatactcgctcggcagtgccgatctgctacgtcgcgcgatgggc
aagaagatcaaggcggagatggacgcccagcgcgcgagctttgttgagggctgcggcacg
cacaacaatatcccgccggccaaggcgaacgagctgttcgacttgatcgataagttcgcc
ggctacgggttcaacaagagccatgccgcggcctacgcgcttgttgcctatcagaccgcg
tggctgaaggcacatcaccgcgccgaattctatgcggcctcgatgagcttcgacacagcg
acgaccgacaagctggcgctgttcacggaggacatgcgccgcggcggcaccgattgcctg
cggcccgacattaacgccagccacgcccatttcaccgtcgaggacggcccagagggaaac
agcgtgcgctatgcgctgggcgcactcaagggcgttggcgaaaaggcgatggatgcactg
gtcgaggagcgggcgcgcaagggaccgttccgaagcctcgaggattttgccgcgcgggtc
gacccgcggctgctcaaccgccggcagctcgaaagtcttgccggggcgggcgcgttcgat
tcgatcaaccccaaccgccctgtagtgttcacggcggccgagacgatccttgcccacgcc
accagtgcgcacgagcagcgcgagagcgggcaggcggcactgtttgggggcgcaagcgag
gaattggcgccgatccgcttgccgcgcgacgcggcatggacgctggcgcagcgaatggcg
gcggagcgcgaatccttcggcttctatttttccgcgcacccagtcgacgcgcacaagcat
ctgcttgccgcgcacaaggttcggaccttcgccgaattgggcgaagtgcgcattgccgaa
ggggagcgggcgggcgcatgcatggcggcgctgatcgaagatgcgcggtggcgcacgtcg
gcgcggggccggcgctacatgatggtcaccgcaagcgacccgtcggggcagttcctcgca
accgcgttcgacgatgacgtctgtgcggcgctggaagcggcggcgcgctccggggcgtgc
ggccttttaagctgcgagctggatcgccgcgccggggacgaggcgccgcgcgtcacgatc
aagcgtatccagccgctcgaaggcctcgcaaaatcgacgcggttgcgcatgaccgttcgc
ctcaacgacgcgggcgcagcgccggcgttgggtgatattctggcgggctcacgaggaggc
aacgggagcgtgcgaatcatcgtgtccatcgcaacggggggcgaagcgcatattcttgcc
gggcgcgacttcgcgctcgacgccgaactggcgttgaagatcgagcgcatcgccggcgag
gggaacgtcgacttgtccgtgcaggaaccgccgaagctcgccctcgtcggctaa
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