Sphingomonas lutea: H9L13_08450
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Entry
H9L13_08450 CDS
T06880
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
slut
Sphingomonas lutea
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slut03016
]
H9L13_08450 (rnd)
Enzymes [BR:
slut01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
H9L13_08450 (rnd)
Transfer RNA biogenesis [BR:
slut03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H9L13_08450 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
QNN66714
UniProt:
A0A7G9SFT9
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All DBs
Position
1640340..1641530
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AA seq
396 aa
AA seq
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MKIHPLITKSEELAALVDRLSQHDFVAVDTEFMRENTYWPDLCLIQVASIDEAAAIDPKA
DINLAPLLSLFINNADVLKVFHAGGQDLEIIHNLTGKMPLPLFDTQVAAMALGHGEQIGY
SNLIESLLGHSLDKGARFTDWSRRPLDKRQIDYAIADVTHLATVFPRMVDKLRKTGRGAW
LDEEMERLADSSSFAFAPEDAWKRLKLPSRNPAVLGRLKAVAAWRETEARSKNLPRGRIV
KDDTLSEIVLHPPKTQDDLARIRGLSAGWKSNDIGARLIAAIEGAKPLEGHELPDREPRR
PGLTKDAALVSDLLKLLLKIRAKETGVAARLIARSDDLEALAAGVRKNLNILSGWRFEEF
GRDALDLVEGRLGFAIEQGKLKMSRLADQPQEKIDA
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccatccgttgattacaaagtccgaggagcttgcagccctcgtcgatcgcctt
tcgcagcacgactttgtcgccgtggacaccgagttcatgcgcgagaacacctattggccc
gacctgtgcctgatccaggtcgcaagcatcgacgaagccgcggcgatcgatcccaaggcg
gacatcaatctcgcaccattgctatcgctgttcatcaacaacgccgatgtcctgaaggtc
ttccacgccggcggccaggatctggagatcatccataatctgacgggtaagatgcccttg
ccgctgtttgacacgcaggtcgcggcgatggccctcggccacggcgagcagatcggctat
tcgaacctgatcgaaagcctgctcggccatagtctcgacaagggggcacgcttcaccgac
tggagccgccggccgctcgacaaacgccagatcgattatgcgatcgccgacgttacgcat
cttgcaaccgtctttccgcgcatggtcgacaaattgcgcaagaccggacgcggtgcctgg
ctcgatgaagagatggagcggctggccgattcgtcgtcgttcgccttcgcgcccgaagat
gcgtggaaacggcttaagctgccgagccggaatccggcggtgcttggccggctgaaggcc
gtcgcggcgtggcgcgagacggaggcccgctccaagaacctgccgcgcgggcgaatcgtc
aaggacgacaccttgagcgagatcgtgcttcacccccccaagacgcaggacgatctcgcc
cgcatccgcggcctatcggccgggtggaagagcaacgatatcggcgcgcgcctgatcgcc
gcgatcgagggtgcgaaaccgctcgaggggcacgagctgcccgatcgcgagccgcgccgc
cccggactgaccaaggatgccgcgctcgtcagcgacctgctcaaattgctgctcaagatc
cgtgccaaggaaaccggcgttgcggcccgcctgatcgcgcgttccgacgatctcgaagcg
ctcgcggcgggcgttcgcaagaacctcaacatcctgtcgggctggcgattcgaagagttt
ggcagggacgcgcttgacctggtcgaaggccggctgggtttcgcgatcgaacagggaaag
ttgaagatgagccggcttgccgaccaaccgcaggagaaaatcgatgcgtaa
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