Sphingomonas lutea: H9L13_09900
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Entry
H9L13_09900 CDS
T06880
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slut
Sphingomonas lutea
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slut03009
]
H9L13_09900 (rimO)
Enzymes [BR:
slut01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9L13_09900 (rimO)
Ribosome biogenesis [BR:
slut03009
]
Prokaryotic type
ribosomal protein modification factors
H9L13_09900 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
RNase_II_C_S1
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNN66952
UniProt:
A0A7G9SGH7
LinkDB
All DBs
Position
1905008..1906360
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AA seq
450 aa
AA seq
DB search
MNVTTFPKPPRVGLVSLGCPKNLVDSERIMTKLRADGYDMSPDYAGADVVLVNTCGFLDS
AKEESLEAIGEAIAENGRVVVTGCMGKEAEAIRARFPDVLAITGAHQYEEVIAAVHDAAP
AVPSPFIDLVPESGLKLTPRHYSYLKISEGCNHRCAFCIIPHLRGDLVSRRPDAVLREAE
KLVAAGTKELLVISQDTSAYGVDLRHKAWPWKGNEVRAHMTDLARELGKLRTPDGDTPWV
RLHYVYPYPHVNDVIPLMAEGLVLPYLDIPFQHASPDVLRRMRRPANDAKVLERIRNWRA
LVPNLAIRSSFVVGFPGETDADFDYLLRWLEEAQLDRVGAFKFEPVEGAPATVMPDQVPD
EVKQYRFEQVMALSAKISADKLAAKVGRTVDVLIDAVDAETGGATGRSKADAPEIDGEVH
LRDAGHLEPGDFVTVQVEDADAHDLFGAPA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcaccaccttccccaagcccccgcgcgtcgggctggtctcgctcggctgtccc
aagaatctggtcgacagcgagcggatcatgaccaagctgcgcgccgacggttacgacatg
tcgcccgattatgcgggcgcagacgtcgtgctggtcaacacctgcggcttcctcgacagc
gccaaggaagaaagcctggaagcgatcggcgaggcgatcgccgagaacgggcgcgttgtc
gtcaccggctgcatgggcaaggaagccgaagccattcgcgcccgcttcccggacgtgctc
gcgatcaccggcgcgcaccagtatgaagaagtcatcgccgcagtccatgatgcggcgccg
gcggtgccctcgccgttcatcgacttggtgcccgaatccgggctgaaactgactccgcgc
cactacagctatttgaagatttccgagggctgcaaccatcgctgcgccttttgcatcatc
ccgcacctgcgcggcgatctcgtcagccgccgccccgatgcggtgcttcgcgaggccgaa
aagctggtcgccgcagggacgaaggaactgctggtcatcagccaggacacgtcggcctac
ggcgtcgacctgcgccacaaggcttggccgtggaagggtaacgaagttcgcgcccacatg
accgatctcgcgcgcgaacttggcaagcttcgcacgcccgacggcgatacgccgtgggtg
cggctgcattacgtctatccctatccgcacgtgaacgacgtcatcccgttgatggccgaa
ggtctggtgctgccctatctcgacatccccttccagcatgccagccccgacgtgctgcgc
cggatgcggcggcccgccaacgatgccaaagtgcttgagcggattcgcaactggcgcgcc
ttggtgccgaatcttgcgatccgctcgagcttcgtcgtcggcttccccggcgagaccgac
gcggatttcgattatctcctgcgctggctcgaagaggcgcagctcgaccgcgtcggcgcg
ttcaagtttgagccggtcgaaggcgcgccggcgacggtcatgcccgatcaggtgccggac
gaggtcaagcagtaccggttcgaacaagtcatggccctgtccgcgaagatcagcgccgac
aagctcgcggccaaggtcggccgtacggtggatgtcctgatcgacgcggtggacgcggag
acggggggcgccacgggccggtcgaaggcggacgcgccggagatcgacggcgaagtccat
cttcgcgatgccggacacctggaacccggcgattttgtcaccgtgcaggtcgaggatgcc
gacgcgcacgacttgttcggcgcgcccgcctga
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