Sphingomonas lutea: H9L13_10830
Help
Entry
H9L13_10830 CDS
T06880
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slut
Sphingomonas lutea
Pathway
slut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L13_10830 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slut03019
]
H9L13_10830 (pnp)
03016 Transfer RNA biogenesis [BR:
slut03016
]
H9L13_10830 (pnp)
Enzymes [BR:
slut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H9L13_10830 (pnp)
Messenger RNA biogenesis [BR:
slut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9L13_10830 (pnp)
Transfer RNA biogenesis [BR:
slut03016
]
Prokaryotic type
tRNA degradation factors
H9L13_10830 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QNN67112
UniProt:
A0A7G9SGY7
LinkDB
All DBs
Position
2088191..2090563
Genome browser
AA seq
790 aa
AA seq
DB search
MFDTKTVEIDLGGKTLKLETGRVARQADGAVLATLGETVVLCAVTAAKSVKPGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEILCIAQVLSY
DGENEPDIVAMIAASAALTISGVPFMGPIGAARVGYQDGEYILNPTQTQIAEGKLDLVVA
GTPGAVMMVESEAQELSEEEMLGAVMFGHKASQDVCRAIISLAEKAAKDPWDLDLLEDKA
ETKAKLKDVIGKDLEAAYKLTNKQERQTAINAAREKAREAFADLQESDPAAYLGTLKLVK
KLEADVVRGAILKEGRRIDGRDTKTVRPIESMVGFLPRTHGSALFTRGETQAIVTTTLGT
KDSEQMIDGLDGLSYSRFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPMLPGV
EEFPYTVRVLSDITESNGSSSMATVCGGSLAMMDAGVPLKRPVAGIAMGLILEGQDFAVI
SDILGDEDHLGDMDFKVAGTSEGITALQMDIKVAGITEEIMKTALAQAKDGRAHILGEMA
KALDHTREELSAHAPRIETMQIPKDKIREVIGTGGKVIREIVAETGAKVDIDDEGVIKIS
SSDVNQIEAARQWIRGIVAEPEPGTIYTGKVASIVDFGAFVTFMPGKDGLVHVSEIKNER
VENVRDVLSEGQEVKVKLLEVDQRGKVRLSMRLVDQETGAELEDTRPPREPREGGDRGPR
GEGRGDRHRGGGRDRDRGPRRDGGGGGRGGDRDRGPRGDRGDRGPRRESSDDNGPAPEFA
PAFLTGNNED
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatacgaaaactgtagaaatcgatcttggcggaaagaccctcaagctcgaaacg
ggccgcgttgcccgccaggccgacggcgcggtcctcgcgaccctcggcgaaaccgttgtc
ctttgtgcggtcaccgccgccaagtcggtcaagccgggccaggacttcttcccgctgacc
gtccactaccaggaaaaattctcggccgccgggcgcatcccgggcggcttcttcaagcgt
gagcgcggcgccaccgaaaaggagacgctgaccagccgcctgatcgaccgccccatccgc
ccgctcttcccggaaggcttctacaacgagattctctgcattgcgcaggtgctgtcttat
gacggcgagaacgagcccgacatcgtcgccatgatcgcggcatcggccgccctcaccatc
tccggcgtgcccttcatgggcccgatcggcgccgcgcgcgtcggctatcaggacggcgaa
tatatcctcaacccgacccagactcagattgccgagggcaagctcgacctggtcgtcgcc
ggaacgcccggcgccgtcatgatggtcgaatccgaagcgcaggagctgtccgaagaggag
atgcttggcgccgtcatgttcggccacaaggccagccaggacgtctgccgtgcgatcatc
agcctggccgaaaaggcggcgaaggatccgtgggacctcgaccttctcgaagacaaagcc
gaaaccaaggccaagctcaaggacgtcatcggcaaggatctcgaggcggcctacaagctg
accaacaagcaggagcggcagacggccatcaacgccgcccgcgaaaaggctcgcgaggca
ttcgccgacctgcaggaatccgatcccgccgcctatctcggcacgctcaagctggtgaag
aagctcgaggcggacgtcgttcgcggtgcgatcctcaaggaaggccgccgcatcgacggc
cgcgacaccaagacggttcgcccgatcgaaagcatggtcggcttcctgccgcgcacgcac
ggctcggccctgttcacccgcggggaaacgcaagcgatcgtcaccacgacgctgggcacc
aaggacagcgagcagatgatcgatggcctcgacggcctcagctactcgcgcttcatgctg
cactataacttcccgccctattcggtcggtgaagtcggccgcttcggtgcgccgggccgc
cgcgaagtcggccacggcaagctcgcctggcgcgcgcttcacccgatgctgccgggcgtg
gaagaatttccgtacaccgtgcgcgttctgtcggacatcaccgaatccaacggcagctcg
tcgatggcgacggtgtgcggcggcagcctcgcgatgatggacgccggcgttcccttgaag
cgcccggtcgcgggcattgccatgggcctcattctggaaggtcaggacttcgcggtgatc
agcgacatcctgggtgacgaagaccacctcggcgacatggacttcaaggtcgcagggacg
tcggaaggcatcaccgcgctgcagatggacatcaaggtcgccggcatcaccgaggagatc
atgaagaccgccctcgcccaggcgaaggacggccgcgcccacatcctcggcgaaatggcc
aaggcgctcgatcacacccgtgaagagctgtcggcccatgctccgcgcatcgagacgatg
cagatcccgaaggacaagatccgggaagtcatcggcaccggcggcaaggtcatccgcgaa
atcgtcgcggagaccggcgccaaggtcgacatcgacgacgagggcgtgatcaagatcagc
tcgtccgacgtcaaccagatcgaggcggcgcgtcagtggatccgcggcatcgtcgccgag
cccgagccgggcacgatctacaccggcaaggtcgccagcatcgtcgatttcggcgcgttc
gtgaccttcatgccgggcaaggacggcctggtccacgtctcggaaatcaagaacgagcgg
gtcgagaacgtccgcgacgtcctgtccgaaggccaggaggtcaaggtcaagctgctcgaa
gtcgatcagcgcggcaaggttcgcctgtcgatgcgtctcgtcgaccaggaaaccggcgcc
gagctggaggacacccggcccccgcgcgaaccgcgtgaaggcggcgaccgtggtccgcgc
ggcgaaggccgtggcgaccgtcatcgtggcggcggccgtgaccgcgatcgcggcccgcgc
cgcgacggtggtggcggcggacgcggcggcgaccgcgaccgtggcccgcgcggcgatcgc
ggtgatcgtggtccccgccgggaaagtagcgacgacaacggccccgcgccggagttcgca
cccgcctttctgacgggaaataacgaggactag
DBGET
integrated database retrieval system
