Sphingomonas lutea: H9L13_11705
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Entry
H9L13_11705 CDS
T06880
Name
(GenBank) RluA family pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
slut
Sphingomonas lutea
Brite
KEGG Orthology (KO) [BR:
slut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slut03009
]
H9L13_11705
03016 Transfer RNA biogenesis [BR:
slut03016
]
H9L13_11705
Enzymes [BR:
slut01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
H9L13_11705
5.4.99.29 23S rRNA pseudouridine746 synthase
H9L13_11705
Ribosome biogenesis [BR:
slut03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
H9L13_11705
Transfer RNA biogenesis [BR:
slut03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
H9L13_11705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QNN67259
UniProt:
A0A7G9SHD4
LinkDB
All DBs
Position
complement(2248917..2249570)
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AA seq
217 aa
AA seq
DB search
MDLSDRILFVDGDAMVIDKPAGLPVDAPRRGGESLAARMAELRLGFRSSPVPMHRLDQDT
SGCLLLARNARARAALQKAFEAREVRKSYLAVVGSAIQEETGTIDLPLGKVSSAEAGWRM
VADPNGQSALTNWCRIAVRDGRTLVEFTPVTGRTHQIRAHAREAFGSGIVGDRVYGIPGG
PMLLHASRLVVPREGRDLIDVSAPLPDYFGEWRDAAG
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggacctctccgaccgcattctcttcgtcgatggcgacgcgatggtcatcgacaagccc
gcgggcttgccggtcgatgcgccgcgccggggcggggagtcgctcgcggcgcggatggcg
gagctgcgtctcggcttccgctcctcgccggtgccgatgcatcgcctcgaccaggatacg
tcgggctgcctgctgcttgcccgcaacgcccgcgcacgggccgcgctgcagaaagcattc
gaagcccgcgaggtgcgcaaatcctatcttgccgtggtcggcagcgcgatccaagaggag
accggcacgatcgacctgccgctcggcaaggtatcgagcgccgaagccggctggcgcatg
gtcgccgatcccaatggccagtcggcactgacgaactggtgccggatcgcggtgcgcgac
ggccgtaccctggtcgaattcaccccggtcaccggccgcacgcaccagatccgcgctcac
gctcgcgaggcattcggcagcgggatcgtcggcgaccgcgtctacggcattccgggcgga
ccgatgctgcttcacgcctcgcgcctcgtcgtcccgcgcgaagggcgtgacctgatcgac
gtcagcgcgcctttgcccgactatttcggtgagtggcgcgatgcggccggatga
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