Streptomyces lividans: SLIV_02590
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Entry
SLIV_02590 CDS
T03222
Name
(GenBank) RNA polymerase secondary sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
slv
Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slv03021
]
SLIV_02590
Transcription machinery [BR:
slv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLIV_02590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
DUF7343
HTH_3
HTH_37
HTH_31
MarR_2
MarR
HTH_Crp_2
GerE
Sigma70_ECF
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AIJ11545
LinkDB
All DBs
Position
542620..543573
Genome browser
AA seq
317 aa
AA seq
DB search
MRAITGSVPHITSRDGAAAPVTGRQPFEWPSGGFALSIHIYEDLPAPLLREVRVMRVAGR
TQPHPHDDAPDTAAAFERLAGLPEGPERKALRDNLIRVWLPMAERIAVRFRGRGENLEDL
YQVAALGLVKAVDHYDPERGHAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRIQDLRNRVR
KSAKELAQTTPGRAPTVEEIAEHAQLTTAEVRTGMEALECFSALSLEAEMPGTDGYALGD
ALGGPDPAFDAVVDRVAVRPCLEALPERERTILYLRFFGGMTQSRIAQQLGISQMHVSRL
LTGCFDRIREEILAEAR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcgatcaccgggagcgtgccgcacatcacgtcccgcgacggggcggccgcaccg
gtcaccggcaggcagccgttcgagtggccgtccgggggattcgcgctcagtatccatata
tacgaggacttgccagcacccctgctgagggaggtgcgcgtgatgcgtgtcgccggcaga
acccagccccacccgcacgacgacgctcccgacacggccgcggcgttcgaacggctcgcc
gggctgcccgagggaccggagcgcaaggcgctgcgggacaatctgatccgggtctggctg
cccatggccgagcggatcgccgtccgcttccggggccgcggcgagaacctggaggatctc
tatcaggtggcggccctcggcctggtcaaggccgtcgaccactacgacccggagcgcggc
cacgccttcgaggcgtacgcggtgccgaccgtgaccggtgagatcaaacggcatttccgc
gaccacatgtggacgctgcacgtaccccgccggatccaggacctgcgcaaccgggtccgc
aagtcggcgaaggaactggcgcagaccacgccggggcgtgccccgaccgtcgaggagatc
gccgagcacgcgcagctgaccaccgccgaggtgcgcaccggaatggaggccctggagtgc
ttctcggccctgtcgctggaggcggagatgcccggcaccgacgggtacgccctcggcgac
gcgctgggcggccccgatcccgccttcgacgcggtggtggaccgggtggccgtccggccc
tgcctggaggcactgcccgagcgcgaacgcaccatcctctacctgcgcttcttcggaggg
atgacccagagccgcatcgcccagcagctcggcatctcgcagatgcacgtctcccggctg
ctcaccggctgcttcgaccggatacgtgaggagatcctggcggaggcccgctga
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