KEGG   Streptomyces lividans: SLIV_05825
Entry
SLIV_05825        CDS       T03222                                 
Symbol
sigF1
Name
(GenBank) RNA polymerase sigma factor, sigB/F/G-like
  KO
K03090  RNA polymerase sigma-B factor
Organism
slv  Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:slv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slv03021]
    SLIV_05825 (sigF1)
Transcription machinery [BR:slv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SLIV_05825 (sigF1)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 MarR_2 HTH_24 HTH_23 GerE HTH_Crp_2 MarR Sigma70_ECF DUF7343 DUF134 HTH_3 HTH_ParB DUF7342 UPF0122
Other DBs
NCBI-ProteinID: AIJ12180
UniProt: A0ABN4DN06
LinkDB
Position
complement(1305002..1305802)
AA seq 266 aa
MPIHASVKHPHDDAPDTADAFRRLATLPDGPEHDELRDRIVEAWLPMAERLAGRFRSRGE
SFEDLRQVAALGLVKAVDRYDPERGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQEL
RNRVRFAGQDLSQTIPGRRPTVAEIAERAELSEEDVRVGLEALESFTALSLDAELPGSED
GYSLGDALGAPDPALDTVVDREAVKDRLAALPPRERAILYMRFFDDMTQSRIAEQLGISQ
MHVSRLITRCCDRVREQVLRDPGPQA
NT seq 801 nt   +upstreamnt  +downstreamnt
atgccgatccacgccagcgtgaagcacccgcacgacgacgcccccgacaccgccgacgcc
ttccgtcggctcgccacccttcccgacggtcccgagcacgacgagctgcgcgaccggatc
gtcgaggcctggctgcccatggccgaacggctggcgggacgattccgcagccgcggcgag
agcttcgaggacctgcgccaggtcgcggccctcggcctggtcaaggccgtcgaccggtac
gaccccgagcgcggcaacgccttcgagagctacgccgtaccgaccatcaccggggagatc
aagcgccacttccgggaccacatgtggaccctgcacgtgccgcgccgggtccaggaactg
cgcaaccgcgtgcgcttcgccggccaggacctgtcccagaccattccgggccgcaggccc
accgtcgccgagatcgccgagcgcgccgaactgagcgaggaggacgtccgggtcgggctc
gaagcgctggagagcttcaccgccctgtccctggacgccgaactccccggcagcgaggac
ggctactcgctgggcgacgcgctcggcgcccccgacccggccctcgacacggtcgtcgac
cgcgaggcggtcaaggaccggctggccgccctgcctccgcgcgagcgcgccatcctgtac
atgcgcttcttcgacgacatgacccagagccgtatcgcggagcagctcggcatctcccag
atgcacgtctcccgcctgatcacccgctgctgcgaccgggtgcgggagcaggtcctgcgg
gatccgggtccgcaggcgtga

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