KEGG   Streptomyces lividans: SLIV_09810
Entry
SLIV_09810        CDS       T03222                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
slv  Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:slv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slv03400]
    SLIV_09810
Enzymes [BR:slv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SLIV_09810
    5.6.2.6  RNA 3'-5' helicase
     SLIV_09810
DNA repair and recombination proteins [BR:slv03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SLIV_09810
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH3_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C ResIII DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: AIJ12966
LinkDB
Position
2244568..2249640
AA seq 1690 aa
MVSSAHRALDGFSPATRGWFTGAFSAPTSAQAGAWQAISQGSDVLVVAPTGSGKTLAAFL
AALDQLTSTPPPADPKKRCRVLYVSPLKALAVDVERNLRSPLTGIRQESVRLGLPEPEVK
VGIRSGDTPAAERRALSTRPPDILITTPESLFLMLTSATRDALTGIETVILDEVHAVAGT
KRGAHLALTLERLDELLPKPARRIGLSATVRPVDEVARFLAPRGRVEIVQPESGKEFDLS
VVVPVEDLGELGGSPVADGNEGAERPSIWPHVEERITDLVQSHRSTIVFANSRRLAERLC
NRLNEIAYERATGEPLDEHHSPAELMGGSGAAQGAPPVIARAHHGSVSKEQRALVEEDLK
AGRLPAVVATSSLELGIDMGAVDLVVQVESPPSVASGLQRVGRAGHQVGAVSTGVVFPKY
RGDLVQSAVVTERMRSGAIEALRIPANPLDVLAQQLVAMTALDTWQVDDLLTTVRRAAPF
ASLPESAFTAVLDMLAGRYPSDAFAELRPRVVWDRVAGTVTGRPGAQRLAVTSGGTIPDR
GLFGVFLAGADPKKGGGRVGELDEEMVYESRVGDVFTLGTSSWRIEDITRDRVLVSPAPG
VPGRLPFWKGDQLGRPLELGRALGAFLREVGSLSKEDARLRLVTAGLDAWAADNVLSYLD
EQREACGHVPDDRTIVVERFRDELGDWRVVVHSPFGAQVHAPWALALGARLSERYGMDAQ
VMHADDGIVLRLPDADLMGLDFLDQDPAKPGLEYDAEKAPVGAADVVFDKGEVDRVVTDQ
VGGSALFASRFRECAARALLLPRRSPGKRTPLWQQRQRAAQLLEVASEYGSFPIVLEAVR
ECLQDVFDVPGLVELMGDVEARKVRLVEVTTPEPSPFARSLLFGYVAQFLYEGDSPLAER
RAAALSLDSRLLAELLGQAELRELLDAEVLTELERELQWLTEDRRIKDPEGVADLLRVLG
PLTDAELAERGAEPQWAPELAAARRAIRVRIAGADHWAAIEDAGRLRDALGTALPVGVPE
AFTEPVKDPLGDLLARHARTHGPFTSVTAAARFGLGVAVTEGALQRLAGSGRVVQGEFHP
AGIGQEWCDATVLRRLRRRSLAALRHELEPVAPAALGQFLPQWQHIGKGHALRGIDGLVR
AVEQLQGASVPASALEKLVLPSRVAHYNPAMLDELTAAGEVVWAGAGSLPGKDGWVSLYL
ADAAPLLLPPPHPLETTALHESVLSTLSGGYGLFFRQIADQVRATTHPEATDPQLADALW
DLAWSGRLTNDTLAPLRSVLGSGRTAGSTAHRAKRAVPRGRYGSLTAAARPASRTGPPTV
AGRWSLLPDREADGTLRAHALARTLLDRHGVVTRGAVAAEGVEGGFSAVYRILAAFEESG
QARRGYVVEGLGAAQFAMEGAVDRLRAVANARERGDGPAGPEDFPRDGSANRRGTVGSAN
GSGPEGSAPRPGTDGPAGLHDSPGPADDSSLDPFAPFAPQDPFGDIGTGRPSDDVFADPD
GLGRSPSRGDYISPRDYAEPGAGGPRGGGGPRGGGAHGRSEGPRGGYDTGFPGRRDRASV
GPRAVVLAAADPANAYGAALGWPEPPAGATHKPGRKAGSLVVLVEGEPALYMERGGKTLL
LWPSAPDRLPTEDPRLRAAAEALAEAARAGSLGTVTVERVNGTAALMSPFGPLLEGAGFI
ATPRGLRIRA
NT seq 5073 nt   +upstreamnt  +downstreamnt
atggtcagctccgcacaccgagccctggacggcttctcacccgcgacccgcggctggttc
acgggggccttctccgcgcccacctccgcgcaggcgggcgcgtggcaggccatctcgcag
ggctcggacgtcctggtggtcgcccccaccggttccggcaagacgctggccgccttcctc
gccgcgctggaccagctgacctcgactcccccgcccgccgaccccaagaagcgctgccgc
gtcctgtacgtctccccgctgaaggccctggccgtcgacgtcgagcgcaatctccgcagt
ccgctgaccggcatccgtcaggagtccgtgcgcctcggcctgcccgagcccgaggtcaag
gtcggcatccgctccggcgacaccccggccgccgagcgccgtgccctgtccacccggccg
ccggacatcctgatcaccaccccggagtccctcttcctgatgctgacgtcggccacgcgc
gacgcgctgaccggcatcgagacggtgatcctggacgaggtgcacgcggtcgcgggcacc
aagcgcggcgcccatctcgcgctcaccctggagcggctggacgagctgctgccgaagccg
gcccgccgcatcggactgtcggcgacggtccgcccggtggacgaggtcgcccggttcctc
gccccgcgcggccgggtcgagatcgtccagccggagtcgggcaaggagttcgacctgtcc
gtcgtcgtccccgtagaggacctcggcgagctgggcggctccccggtcgcggacggcaac
gagggggcggagcgcccgtcgatctggccgcacgtcgaggagcggatcaccgacctggtc
cagtcgcaccgctccacgatcgtcttcgccaactcccgacggctggccgagcgtctgtgc
aaccggctcaacgagatcgcgtacgagcgggccaccggcgagcccctggacgagcaccac
tcccccgccgagctgatgggcggctcgggcgccgcccagggcgccccgcccgtgatcgcc
cgcgcccaccacggctcggtctccaaggagcagcgcgccctggtcgaggaggacctcaag
gcggggcggctgcccgccgtcgtcgcgacctccagcctggagctgggcatcgacatgggc
gccgtcgacctggtggtccaggtcgagtcgccgccctccgtcgcctccggcctgcagcgc
gtggggcgcgcgggccaccaggtcggcgcggtctccacgggtgtggtcttccccaagtac
cgcggcgacctggtgcagtccgccgtggtcaccgagcggatgcgcagcggcgccatcgag
gccctgcggatccccgccaacccgctggacgtgctggcccagcagctggtggcgatgacc
gcgctggacacctggcaggtcgacgacctcctcaccaccgtccgccgcgccgcacccttc
gcctcgctgccggagtcggccttcaccgccgtcctggacatgctcgcgggccgctacccg
tccgacgccttcgccgagctgcgcccgcgcgtggtgtgggaccgggtcgccggcacggtc
accggccgcccgggggcgcagcggctcgccgtgacgtccggggggacgattcccgaccgc
gggctcttcggggtgttcctcgccggggccgacccgaagaagggcggcggccgggtcggc
gagctggacgaggagatggtgtacgagtcccgcgtgggcgacgtcttcacgctcggcacc
agttcctggcggatcgaggacatcacccgcgaccgggtcctggtctccccggcgccgggc
gtgccgggcaggctgcccttctggaagggcgaccagctgggccgccccctggagctgggc
cgcgcgctgggcgcgttcctgcgcgaggtcggctccctgtccaaggaggacgcccggctg
cgcctggtcaccgcgggtctggacgcctgggccgcggacaacgtgctgtcgtacctcgac
gaacagcgcgaggcctgcggccacgtccccgacgaccgcaccatcgtcgtcgagcgcttc
cgggacgagctgggcgactggcgggtcgtggtccattcccccttcggcgcccaggtccac
gccccctgggccctcgccctgggcgcccgcctgtccgagcgctacggcatggacgcccag
gtcatgcacgccgacgacggcatcgtgctgcgcctgccggacgccgacctgatgggcctt
gacttcctcgaccaggaccccgcgaagccgggcctcgagtacgacgcggagaaggcgccg
gtcggcgcggccgacgtcgtcttcgacaagggcgaggtcgaccgggtcgtcaccgaccag
gtgggtggctcggccctgttcgcgtcccgcttccgcgagtgcgcggcccgtgcgctgctg
ctgccgcgccgcagccccggcaagcgcaccccgctgtggcagcagcgccagcgcgccgcg
cagctgctggaggtggcgagcgagtacggctcgttcccgatcgtcctggaagcggtccgc
gagtgcctccaggacgtcttcgacgtccccggcctggtcgagctgatgggcgacgtggag
gcccgcaaggtccgcctggtcgaggtcaccaccccggaaccgtcgccgttcgcccgctcc
ctactcttcggctacgtggcccagttcctgtacgagggcgactcgccgctcgccgagcgc
cgggccgccgccctgtccctggactcgcggctgctggccgagctgctcggccaggcggag
ctgcgcgagctgctcgacgcggaggtgctcaccgagctggagcgcgagctgcaatggctc
accgaggaccgccgcatcaaggatcccgagggcgtcgccgacctgctgcgggtgctcggc
ccgttgacggacgcggagctggccgagcgcggcgccgaaccgcagtgggcgcccgagctg
gccgcggcccgccgcgcgatcagggtgcggatcgccggcgccgaccactgggcggcgatc
gaggacgcgggccgtctgcgcgacgcgctgggcacggcgctgcccgtcggtgtgccggag
gccttcaccgagccggtcaaggacccgctcggtgacctcctcgcccgccatgcccgcacc
cacggccccttcacgtcggtcaccgcggcggcccgcttcggtctgggcgtcgcggtcacc
gagggcgccctccagcggctcgcggggtcggggcgggtcgtgcagggcgagttccatccg
gccggcatcggccaggagtggtgcgacgcgaccgtcctgcgcaggctgcgccgccgttcc
ctggccgcgctccggcacgagctggagccggtggcaccggccgcgctcggccagttcctc
ccccagtggcagcacatcgggaaggggcacgcgctgcgcggcatcgacgggctggtccgc
gccgtcgagcagttgcagggcgcctccgtgcccgcctccgccctggagaagctggtgctg
ccctcccgcgtggcgcactacaaccccgcgatgctggacgagctgacggccgccggtgag
gtggtgtgggccggggcggggtcactgcccggcaaggacggctgggtctccctctacctc
gcggacgcggccccgctgctcctgccgcccccacaccccctggagacgaccgccctgcac
gagtccgtcctgagcacgctctcgggcggatacggcttgttcttccgccagatcgccgac
caggtccgcgccaccacccacccggaggccaccgatccgcagctggccgacgccctgtgg
gacctggcctggtccgggcggctgaccaacgacacgctggcacccctgcgctccgtgctg
ggctccggccgcaccgcgggttccacggcccaccgtgccaagcgcgcggtgccgcgcggc
cggtacggctcgttgacggccgccgcccgcccggcgtcccgcaccggcccgccgacggtc
gcgggccgctggtcgctgctgcccgaccgcgaggccgacggcaccctgcgggcccatgcc
ctggcccgcacgctgctcgaccggcacggcgtggtgacccgcggagccgtcgccgcggag
ggcgtcgagggcggcttctcggcggtgtaccgaatcctggccgcgttcgaggagagcggc
caggcccgccgcggttacgtggtggaggggctcggcgcggcacagttcgccatggagggc
gccgtggaccggttgcgcgcggtggccaacgcacgcgagcgcggtgatggcccggccggg
ccggaggacttcccgcgcgacggctccgcgaaccgccgcgggaccgttggctccgcgaac
ggatcggggcccgagggctccgcgccccggcccggtaccgacggccccgccggacttcac
gactcccccggccccgccgacgactcctccctcgaccccttcgcccccttcgccccccag
gaccccttcggcgacatcggcaccggccgcccctccgacgatgtcttcgccgaccccgac
ggtctggggcgttcaccctcccggggcgactacatctcgcctcgcgactacgccgagccg
ggcgccggcggtccgcgcgggggcggcggtccgcgcgggggcggcgcgcacggccgctcc
gagggcccgcgcggcgggtacgacaccggtttccccggccgtcgcgaccgcgcctccgtc
ggtccgcgggccgtcgtgctggccgccgccgacccggcgaacgcttacggtgcggccctc
ggctggcccgaaccgccggccggtgccacgcacaagccgggtcgcaaggcgggctccctg
gtggtgctcgtcgagggcgaaccggcgctctacatggagcgcggcggcaagaccctgctg
ctgtggccctctgccccggaccggctgcccaccgaggacccacggctgcgagccgccgcc
gaagcgctcgcggaggccgcccgcgccggttccctcggcacggtcacggtggagcgggtc
aacggcacggcggccctgatgtccccgttcggccccctcctggagggggcggggttcatc
gccaccccgcgcggtctgcgcatcagggcgtga

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