Streptomyces lividans: SLIV_09855
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Entry
SLIV_09855 CDS
T03222
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slv
Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slv03009
]
SLIV_09855 (rimO)
Enzymes [BR:
slv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SLIV_09855 (rimO)
Ribosome biogenesis [BR:
slv03009
]
Prokaryotic type
ribosomal protein modification factors
SLIV_09855 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AIJ12975
LinkDB
All DBs
Position
complement(2254207..2255688)
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AA seq
493 aa
AA seq
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MPESRTVALVTLGCARNEVDSEELAGRLEADGWKLVDDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELADALPEADGVLGFDDYADISDRLQTIL
NGGIHAAHTPRDRRKLLPISPAERQEAGAAVALPGHGPTDLPEGVAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPNLAEVDGIERVRVSYLQPAEMRPGLIDVLTSTEKVAPYFDLSF
QHSAPNVLRAMRRFGDTDRFLELLDTIRSKAPEAGVRSNFIVGFPGESEADLAELERFLN
HARLDAIGVFGYSDEEGTEAATYGDKLDEDVVAERLARVSRLAEELVSQRADERVGATVR
VLVESVDPAGEGDGVRGRAEHQAPETDGQVLLTSGAGLSVGRMVDAKVVGTEGVDLVAEP
LLGSPEWSEEAGR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaagccgtaccgtcgcactcgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtctggaggcggacggctggaagctcgtcgacgacgccgag
gaagcggacgtcgccgtcgtgaacacatgcggcttcgtcgaggccgccaagaaggactcc
gtggacgccctcctggaggccaacgacctcaagggccacggaagaacgcaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctggccgacgccctcccggaggcc
gacggcgtcctcggcttcgacgactacgccgacatctccgaccgcctgcagaccatcctg
aacggcggcatccacgccgcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgccgagcggcaggaggccggtgccgcggtcgccctgccgggacacggcccgaccgac
ctgcccgagggcgtcgcccccgcctcggggccccgcgcgccgctgcgccgccggctggac
ggctccccggtcgcctcggtgaagctggcctcgggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgccccagcgacgtgctgaacgag
acacgctggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccggctcctggagtcgctgctgccgaacctggcc
gaggtcgacggcatcgagcgggtgcgggtcagctacctccagccggccgagatgcgcccc
ggcctgatcgacgtgctgacctccaccgagaaggtcgcgccctacttcgacctctccttc
cagcactccgcgccgaacgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggagctcctcgacaccatccggagcaaggcgcccgaggcgggcgtgcgctccaacttc
atcgtcggcttccccggcgagtccgaggccgacctcgccgagctggagcggttcctcaac
cacgcccgcctcgacgccatcggcgtcttcggctactccgacgaggagggcaccgaggcg
gcgacctacggcgacaagctggacgaggacgtcgtcgccgagcggttggcacgggtctcc
cgcctggccgaggaactggtctcgcagcgggccgacgagcgcgtcggggcgaccgtgcgg
gtactcgtcgagtccgtggacccggccggcgagggggacggcgtccgcggccgcgcggag
caccaggcgccggagacggacggccaagtgctgctcacgagcggcgcgggcctgagtgtc
ggtcgtatggtcgacgcgaaggtggtcggtacggagggtgtcgacctggtggccgaaccg
ctgctggggtcgcccgagtggagtgaggaggccggcagatga
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