KEGG   Streptomyces lividans: SLIV_12150
Entry
SLIV_12150        CDS       T03222                                 
Name
(GenBank) SigH protein
  KO
K03090  RNA polymerase sigma-B factor
Organism
slv  Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:slv00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slv03021]
    SLIV_12150
Transcription machinery [BR:slv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SLIV_12150
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 DUF7343 Sigma70_ECF MarR NirdL-like_HTH MarR_2 HTH_24 HTH_3 IF2_N HTH_Crp_2 GerE HTH_AraC
Other DBs
NCBI-ProteinID: AIJ13423
UniProt: D6EUP4
LinkDB
Position
2791088..2792173
AA seq 361 aa
MRDGDGPVRDEERGTRELPAEGTRSPNEARRTADGIDGIPEQARPHPEDETSPGAAVPGE
GQRTGENPVRPVRAEARARERATGGTMSEHERHADGHAPGARGTQGTRHDPQDRSGARLL
FAELRTLEKDSPEYAELRNRLVRMHLPLVEHLARRFRNRGEPLDDLTQVATIGLIKSVDR
FDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELRLALTTATAELSQLHGRSP
TVHELAEKLSISEEEVLEGLESANAYSTLSLDVPDTDDESPAVADTLGAEDEALEGVEYR
ESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQMHVSRLLARTLAQLREKLLVE
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
gtgagggacggggacgggccggtgcgggacgaagagcgcggtacacgggagctgccggcc
gagggcacacgttctccgaacgaggcgcgacgcacggcggacggcatcgacggcatcccc
gagcaggcccggccgcatccggaggacgagacctcgcccggggccgccgttccgggcgag
gggcagcggaccggggagaaccccgtccggcccgtccgagcggaggcgagggctcgggaa
agggcgacgggcgggacgatgagcgagcacgagcgacacgccgacggccacgcgccgggt
gcacggggcacgcagggcacacggcacgacccgcaggaccgcagcggggcgcgtctcctg
ttcgccgagttgcgcacgctggagaaggacagcccggagtacgcggagctgcgcaatcgg
ctggtccgcatgcacctgccgctggtcgagcacctcgcgcgccgcttccgcaaccgcggc
gagcccctggacgacctgacccaggtcgccaccatcggcctgatcaagtcggtggaccgg
ttcgacccggaccgcggcgtggagttctccacgtacgcgacgcccacggtcgtcggtgag
atcaagcggcacttccgggacaagggctgggcggtgcgggtcccgcgccggctccaggag
ctgcggctggccctgacgacggccacggcggagctgtcccagctgcacggccgctccccc
acggtccacgaactggccgagaagctgtcgatctcggaggaggaggtcctggagggcctg
gagtcggccaacgcgtactccacgctgtccctggacgtcccggacaccgacgacgagtca
ccggcggtcgccgacaccctcggtgccgaggacgaggccctggagggcgtcgagtaccgg
gagtcgctcaagccgctcctcgaggacctgccaccgcgggagaagcgcatcctgctgctg
cgcttcttcggcaacatgacccagtcccagatcgcgcaggaggtcggcatctcccagatg
cacgtgtcccggctgctggcccgcacgctggcacagctgcgggagaagctgctcgtcgag
gagtaa

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