Streptomyces lividans: SLIV_14375
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Entry
SLIV_14375 CDS
T03222
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slv
Streptomyces lividans
Pathway
slv03420
Nucleotide excision repair
slv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SLIV_14375 (uvrD1)
03430 Mismatch repair
SLIV_14375 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slv03400
]
SLIV_14375 (uvrD1)
Enzymes [BR:
slv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLIV_14375 (uvrD1)
DNA repair and recombination proteins [BR:
slv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SLIV_14375 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
SLIV_14375 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIJ13859
LinkDB
All DBs
Position
complement(3270774..3273269)
Genome browser
AA seq
831 aa
AA seq
DB search
MSSLFDDNFLASLQTPRGHEEEPPPPPEDDHGPEPVPHDLFGGKFDAPPQRDTHYRDGAP
RPALDAAALLEGLNENQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERNVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYRRRFRHVLVDEYQDTNHAQYALVREL
VGVPSEHPVDVPPEAEVPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNQGSGAQITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEVFIRTGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALRRVDEAYGMAARSANAVKR
FNTLMEDLRTIVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVALEF
EQERAEGEEAGTLADFLEKVALVADSDQIPDEEDGDGVVTLMTLHTAKGLEFPVVFLTGM
EDGVFPHMRALGQAKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEE
IPAPHLEWKRTGANGPAPSAPVSGVAASLSSSRSRSRSSASGASGFATGRSAGAEQPTVS
LAVGDRVTHDQFGLGTVVGVKGTGSNAEATIDFGDTKPKRLLLRYAPVEKL
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacaacttcctggcgagcctccagaccccccggggtcacgag
gaggaacccccgccgccgcccgaggacgatcacggaccggagccggttccgcacgatctg
ttcggcgggaagttcgacgcgcccccgcagcgggacacccactaccgggacggcgccccg
cgccccgccctggacgccgccgcgctcctggaggggctgaacgagaaccagcgggccgcc
gtcgtccactccggctccccgctgctcatcgtggccggcgccggctccggcaagacccgc
gtcctcacccaccgcatcgcccacctgctggccgagcggaacgtccacccgggccagatc
ctcgcgatcaccttcaccaacaaggccgcgggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgccaacgcgatgtgggtgatgaccttccacagcgcgtgtgtgcgcatc
ctgcgccgcgagtcgaagaagctcggcttcacctcgtcgttctcgatctacgacgccgcc
gactccaagcggctcatggcgctggtctgccgcgacctggacctggaccccaagcgcttc
ccgcccaagtccttcagcgcgaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggtttcgagaagaccctcgcccaggcctacgccatg
taccagtcgcggctgcgcgaggccaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgccttcccggacgtcgccgagcactaccgccgccgcttccggcac
gtcctggtcgacgagtaccaggacaccaaccacgcccagtacgccctggtgcgcgagctg
gtcggcgtgccctcggagcaccccgtcgacgtgccgccggaggccgaggtgccgcccgcc
gagctgtgcgtggtgggcgacgccgaccagtcgatctacgccttccgcggcgccaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacccagaccatcctcagcgccgccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaaccagggcagcggcgcgcagatcaccgggtac
gtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgcctcacc
gacgcgggcgaggccaaggccggcgacgtcgccgtcttctaccggaccaacgcccagtcc
cgtgtcttcgaagaggtcttcatccgcaccggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaac
ccggaggactcggtgccgctgcgccgcatcctcaacgtccccaagcgcggcatcggcgac
cgcgcggaggcgatgatcgacgccctctcccagcgcgagaagatcagctttccgcaggcg
ctcaggcgcgtcgacgaggcgtacggcatggccgcgcgctccgcgaacgccgtcaagcgg
ttcaacacgctcatggaggacctccgtacgatcgtcgagtccggcgccggaccggcgacg
gtcctggaggccatcctcgaacgcaccggctacctcgccgagttgcaggcctccaccgat
ccccaggacgagacccgcatcgagaacctccaggaactcgcggccgtcgccctggagttc
gagcaggagcgggccgagggcgaggaggccgggacgctggccgacttcctggagaaggtc
gcgctcgtcgccgactccgaccagatcccggacgaggaggacggcgacggcgtcgtcacc
ctgatgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctcaccggcatg
gaggacggcgtcttcccgcacatgcgcgccctcggccaggccaaggagctggaggaggag
cggcggctcgcctacgtcggcatcacgcgtgcccgcgagcggctctacctgacccggtcg
acgctgcgcagcgcctggggccagccgtcgtacaacccgccctcgcggttcctggaggag
atcccggccccgcacctggaatggaagcggaccggggcgaacggtcccgcgccttccgct
ccggtctcgggcgtggccgcctcgctgtcgtcgtcccggtcgcggtcccggtcctcggcg
tcgggtgcgtccggcttcgccacgggcaggtcggccggcgccgagcagcccacggtctcg
ctggcggtcggcgaccgcgtcacgcacgaccagttcgggctcggcacggtggtcggcgtc
aagggcaccggttcgaacgcggaggcgacgatcgacttcggggacaccaagccgaagcgg
ctgctgctgcggtacgcgccggtggagaagctctga
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