Streptomyces lividans: SLIV_15065
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Entry
SLIV_15065 CDS
T03222
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
slv
Streptomyces lividans
Pathway
slv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLIV_15065 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slv03021
]
SLIV_15065 (rpoB)
03400 DNA repair and recombination proteins [BR:
slv03400
]
SLIV_15065 (rpoB)
Enzymes [BR:
slv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SLIV_15065 (rpoB)
Transcription machinery [BR:
slv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLIV_15065 (rpoB)
DNA repair and recombination proteins [BR:
slv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLIV_15065 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AIJ13994
UniProt:
A0ABN4DRJ2
LinkDB
All DBs
Position
complement(3408840..3412325)
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNAASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVES
ALESGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGADEPLDAGVLTTDDVIATIKYLVKLHAGETETVGESGREIVVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVEGQVTDDVDYLTADEEDRFVIAQANAALGDDMRF
AEARVLVRRRGGEVDYVPGDDVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAADAGDVVKAEKAGVVQEVSADYITTTNDDGTYITYRLAK
FSRSNQGTSVNQKVIVAEGDRIIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKINPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLAEEWAQRLQVIGADKVEPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPSGKARLFDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaatgcctcgaccgcgaatacgaacaacgctgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcccctcgaggttccgaacctcctggcgctg
caaaccgagagcttcgactggctcctcggcaacgacgcctggaaggctcgcgtcgagtcg
gctctggagtccggtcaggacgtccccaccaagtccggtctggaagagatcttcgaggag
atctcgccgatcgaggacttctccgggtcgatgtcgctgacgttccgcgaccaccgcttc
gagcctcccaagaacagcatcgacgagtgcaaggaccgcgacttcacgtacgcggccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagacggtc
ttcatgggcgacttcccgctcatgaccaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtcgtgtcgcagctggtccgctcgccgggtgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtgcgcatcgaccgcaagcgcaagcag
tccgtgaccgtcctcctcaaggccctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctcgagaacctctacttcaacccgaagcgctacgacctcgccaaggtcggc
cgctacaaggtgaacaagaagctcggcgcggacgagccgctggacgccggcgtgctcacc
accgacgacgtcatcgccaccatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtcggcgagtcgggccgggagatcgtcgtcgagaccgacgacatcgaccacttcggc
aaccgccgcatccgcaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcggggctgacgcacaagcgtcgt
ctgaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgcgac
gtgcacccgtcgcactacggccgcatgtgcccgatcgagacgcccgaaggcccgaacatc
ggtctgatcggctcgctcgcctcgtacggccgcatcaaccccttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgagggccaggtcaccgacgacgtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgccgcgctgggcgacgacatgcggttc
gccgaggcccgcgtcctggtccgccgtcgtggcggcgaggtcgactacgtccccggtgac
gacgtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgcgatgatc
ccgttcctcgagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gcggtgccgctcatcaagagcgagtccccgctggtcggcaccggcatggagtaccgctcc
gccgccgacgccggtgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccacgaccaacgacgacggcacgtacatcacgtaccgcctggccaag
ttctcccggtccaaccagggcacctcggtcaaccagaaggtcatcgtcgccgagggcgac
cggatcatcgagggccaggtcctggccgacggtccggccaccgagaacggcgagatggcg
ctcggcaagaacctgctggtcgcgttcatgccgtgggagggtcacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgcgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggcgagaccgagctg
acgccggaggagcgcctgctccgcgcgatcttcggtgagaaggcccgtgaggtccgcgac
acctcgctgaaggtcccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaggagggcgacgagcttccccccggtgtgaaccagctggtgcgcgtgtacgtggcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccgccacggcaacaagggcgtc
atctccaagatcaacccgatcgaggacatgccgttcctggaggacggcacgcccgtcgac
atcatcctgaacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggaggagtgggcg
cagcgcctccaggtgatcggcgccgacaaggtcgagcccggcaccaacgtcgccaccccg
gtcttcgacggtgcgcgcgaggacgagctggccggcctgctccagcacaccatcccgaac
cgcgacggcgagcgcatggtgctcccgtccggcaaggcgcggctgttcgacggccgcagc
ggtgagccgttcccggagccgatctcggtcggctacatgtacatcctcaagctccaccac
ctggtcgacgacaagctgcacgcccggtcgaccggcccgtactcgatgatcacccagcag
ccgctgggtggtaaggcccagttcggtggccagcgcttcggtgagatggaggtgtgggcg
ctggaggcttacggcgccgcgtacgccctccaggagctgctgaccatcaagtccgacgac
gtgaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccctgagccc
ggcatccccgagtccttcaaggtgctcatcaaggagatgcagtccctgtgcctcaacgtg
gaggtgctgtcctcggacggcatgtccatcgagatgcgtgacaccgacgaggacgtcttc
cgcgcagcggaggagctcggcatcgacctgtcgcggcgcgagccgagcagcgtcgaagag
gtctga
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integrated database retrieval system
