Streptomyces lividans: SLIV_18890
Help
Entry
SLIV_18890 CDS
T03222
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
slv
Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slv03032
]
SLIV_18890 (gyrB)
03400 DNA repair and recombination proteins [BR:
slv03400
]
SLIV_18890 (gyrB)
Enzymes [BR:
slv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SLIV_18890 (gyrB)
DNA replication proteins [BR:
slv03032
]
Prokaryotic type
DNA Topoisomerases
SLIV_18890 (gyrB)
DNA repair and recombination proteins [BR:
slv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SLIV_18890 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
AIJ14730
LinkDB
All DBs
Position
4195040..4197124
Genome browser
AA seq
694 aa
AA seq
DB search
MLCQKGRFVADSGNPNENNPSTDTGVNDAVSTSHGDASASYDASAITVLEGLDAVRKRPG
MYIGSTGERGLHHLVQEVVDNSVDEALAGHADTIDVTILPDGGVRVVDNGRGIPVGIVPS
EGKPAVEVVLTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTRVAVEVKTDGYRWTQEY
KLGVPTASLARHEATEETGTTVTFWADGDIFETTDYSFETLSRRFQEMAFLNKGLKINLT
DERESAKATAGADEAGEDEKHEVKSVSYHYEGGIVDFVTYLNSRKGELVHPTVIDLEAED
KDKSLSLEVAMQWNGGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLRE
KDDNLTGDDIREGLTAIISVKLAEPQFEGQTKTKLGNTEVKTFVQKVVYEHLTDWLDRNP
NEAADIIRKGIQAAHARVAARKARDLTRRKGLLESASLPGKLSDCQSNDPTKCEIFIVEG
DSAGGSAKSGRNPQYQAILPIRGKILNVEKARIDRILQNQEIQAMISAFGTGVHEDFDIE
KLRYHKIILMADADVDGQHINTLLLTFLFRFMRPLVESGHVYLSRPPLYKIKWGRDDFEY
AYSDRERDALIEMGRQAGKRIREDSVQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDA
AQADDLFSVLMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtgccagaaagggcgcttcgtggccgattccggcaaccccaacgagaacaacccg
tccaccgacaccggcgtgaacgacgcggtgagcacctcgcacggcgatgcttccgcgtcg
tacgacgccagtgccatcaccgtcctcgagggtctggacgcggtccgcaagcgacccggt
atgtacatcggttcaaccggtgagcggggcctgcaccacctggtgcaggaggtcgtggac
aactccgtcgacgaggcactcgccggtcacgcggacacgatcgacgtcacgatcctgccc
gacggcggtgtccgcgtcgtcgacaacggccgcggcatcccggtgggcatcgtcccctcc
gaggggaagccggccgtcgaggtcgtgctgaccgtgctgcacgcgggcggcaagttcggc
ggcggcggctacgcggtctccggtggtctgcacggcgtgggcgtctcggtcgtcaacgcc
ctctccacgagggtggccgtggaggtcaagaccgacggctaccgctggacgcaggagtac
aagctgggcgtccccacggcgtcgctcgcccggcacgaggccaccgaggagaccggcacg
acggtcaccttctgggccgacggcgacatcttcgagaccaccgactactccttcgagacg
ctctcccgacgcttccaggagatggccttcctcaacaagggcctgaagatcaacctcacc
gacgagcgcgagtcggcgaaggccaccgccggcgcggacgaggcgggagaggacgagaag
cacgaggtcaagagcgtctcgtaccactacgagggcggcatcgtcgacttcgtgacgtac
ctcaactcccgcaagggagagctggtgcaccccaccgtgatcgacctcgaggccgaggac
aaggacaagagcctgtccctcgaggtcgcgatgcagtggaacggcggctacacggagggc
gtgtactccttcgccaacatcatccacacgcacgagggcggcacgcacgaggagggcttc
cgcgcggcgctcacctcgctgatcaacaagtacgcgcgcgacaagaagctgctgcgcgag
aaggacgacaacctcacgggcgacgacatccgcgagggcctgacggcgatcatctcggtc
aagctggcggagccgcagttcgagggccagaccaagacgaagctgggcaacaccgaggtg
aagaccttcgtccagaaggtcgtctacgagcacctgacggactggctcgaccgcaacccc
aacgaggccgcggacatcatccgcaagggcatccaggcggcccacgcgcgcgtggcggcc
cgcaaggcgcgcgacctgacccgtcgcaagggcctgctggagtcggcctcgctgccgggc
aagctgtccgactgccagtcgaacgacccgaccaagtgcgagatcttcatcgtcgagggc
gactccgccggcggctccgccaagtccggccggaacccgcagtaccaggcgatcctcccg
atccgcggcaagatcctcaacgtcgagaaggcgcgcatcgaccggatcctgcagaaccag
gagatccaggcgatgatctccgcgttcggcaccggggtgcacgaggacttcgacatcgag
aagctccgctatcacaagatcatcctgatggcggacgccgacgtcgacggccagcacatc
aacaccctgctgctgaccttcctgttccgcttcatgcggccgctggtcgagtccgggcac
gtgtacctgtcccgcccgccgctgtacaagatcaagtggggccgggacgacttcgagtac
gcctactccgaccgcgagcgcgacgcgctgatcgagatgggccgccaggccggcaagcgc
atccgcgaggactcggtgcagcgcttcaagggtctcggcgagatgaacgccgaggagctg
cgcatcacgaccatggaccaggagcaccgcgtgctcggtcaggtcacgctcgacgacgcc
gcgcaggccgacgacctgttctcggtgctgatgggcgaggacgtcgaggcccggcgcgcg
ttcatccagcgcaacgccaaggacgtccgcttcctcgacatctga
DBGET
integrated database retrieval system
