Streptomyces lividans: SLIV_22355
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Entry
SLIV_22355 CDS
T03222
Symbol
sigF4
Name
(GenBank) RNA polymerase sigma factor, sigB/F/G-like
KO
K03090
RNA polymerase sigma-B factor
Organism
slv
Streptomyces lividans
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slv03021
]
SLIV_22355 (sigF4)
Transcription machinery [BR:
slv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SLIV_22355 (sigF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
Sigma70_ECF
HTH_Crp_2
MarR_2
HTH_24
HTH_3
DUF8073_C
HTH_31
HTH_28
MarR
DUF7343
PF0610-like_N
GerE
KORA
HTH_Tnp_ISL3
DnaB_bind
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
AIJ15402
UniProt:
A0ABN4DX57
LinkDB
All DBs
Position
complement(4980389..4981303)
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AA seq
304 aa
AA seq
DB search
MSPRLDGSRTHQATSTLPPEHLDPIEHHDAVVDHDDALAGLPDIPAYDEVAPADARALSK
TLFERLESLEEGTHEHAYVRNTLVELNLALVKFAASRFRSRSEPMEDIIQVGTIGLIKAI
DRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGDELAQRLDR
APTVSELAEHLGLSKDEVVEGMAASNAYTASSLDAQPEEDDAEGALADRIGYEDHGLEGI
EYVESLKPLIAELPSRDRKILSLRFVAGMTQSEIGEELGISQMHVSRLLSRTLVRLRKGL
TVEE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacggatcgcgtacccaccaagcgacgtcgacactccctccggaa
catctggatcccatcgagcaccacgacgccgtcgtcgaccacgacgacgcactcgccggg
cttccggacatccccgcgtacgacgaggtcgctccggcggacgccagggccctgtccaag
accctcttcgagcggctggagtcgctggaggaaggcacccacgaacacgcgtacgtacgc
aacacgctcgtcgagctgaacctcgcgctggtcaagttcgccgcctcccgcttccgctcg
cgcagcgagccgatggaggacatcatccaggtcggcaccatcggcctgatcaaggcgatc
gaccgcttcgagctgtcgcgcggtgtggagttccccacgttcgcgatgccgaccatcatc
ggcgagatcaagcgcttcttccgcgacacctcgtggtccgtgcgcgttccgcgccgcctc
caggagctgcggctcgacctcgcgaaggccggcgacgagctggcccagcgcctcgaccgc
gcccccaccgtctccgagctggccgaacacctcggcctgtccaaggacgaggtcgtcgag
ggcatggcggcgtccaacgcctacaccgcctcctcgctggacgcccagccggaggaggac
gacgcggagggcgcgctcgccgaccgcatcggctacgaggaccacgggctcgagggcatc
gagtacgtcgagtcgctgaagccgctgatcgccgagctgccctcccgggaccggaagatc
ctctccctgcgtttcgtcgccggcatgacccagtcggagatcggcgaggagctgggcatc
tcccagatgcacgtctcgcgtctgctgtcgcggaccctcgtacggctgcgcaaggggctc
acggtcgaggagtga
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