Streptomyces lividans: SLIV_27385
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Entry
SLIV_27385 CDS
T03222
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
slv
Streptomyces lividans
Pathway
slv03030
DNA replication
slv03430
Mismatch repair
slv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLIV_27385 (dnaE)
03430 Mismatch repair
SLIV_27385 (dnaE)
03440 Homologous recombination
SLIV_27385 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slv03032
]
SLIV_27385 (dnaE)
03400 DNA repair and recombination proteins [BR:
slv03400
]
SLIV_27385 (dnaE)
Enzymes [BR:
slv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLIV_27385 (dnaE)
DNA replication proteins [BR:
slv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLIV_27385 (dnaE)
DNA repair and recombination proteins [BR:
slv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLIV_27385 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIJ16388
LinkDB
All DBs
Position
6127182..6130721
Genome browser
AA seq
1179 aa
AA seq
DB search
MSKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMSHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIQWGQPHQKRDDVSGSGGYTHKTMWATNSKGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGIVASTGCPSGEVQTRLRLGHFDEALKAAADYQD
IFGKDRYFLELMDHGIEIEHRVRDGLLEIGRKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCANTRLIAEMIDTTGMFEKRD
LMPKFDIPEGFTEITWFQEEVRRGMERRFPGGVPEDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNQGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPTHPRYSEAGEIRSMYESEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPIWVRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGIDLDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNGLQEITPIHKELEEPLQEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFVLFQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTGYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
MSNFAAQGDDVILFGLSAVRNVGTNVVESIIKCRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGDEQSDEPGFGL
DVVFGEDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGISQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSLECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELMIPDLSNAGTNAPVVLTIPATRITPPMVSRLGEILTHHRGDSEVRI
KLQGPTKTTVLRLDRHRVKPDPALFGDLKVLLGPSCLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctcaaggacatgttcgacgcgtgcaacgagatgggcatgtcgcacatcgcc
atgtccgaccacggcaacctgcacggggcgtacgacttcttccactccgcgaagaaggcc
ggagtcaccccgatcatcgggatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccagtggggccagccgcaccagaagcgggacgacgtctcgggttcgggcggt
tacacccacaagaccatgtgggcgacgaacagcaagggcctgcacaacctcttccggctc
tcctccgacgcctacgccgagggctggctgcagaagtggccgcggatggacaaggagacc
atcagccagtggtccgagggcatcgtcgcctccaccggctgcccctccggcgaggtgcag
acccggctgcgcctcggccacttcgacgaggccctgaaggccgccgccgactaccaggac
atcttcggcaaggaccgttacttcctggagctgatggaccacggcatcgagatcgagcac
cgggtccgcgacggactcctggagatcggcaggaagctcggcatcccgccgctggtgacg
aacgactcgcactacacctacgcgcacgaggcgaccgcccacgacgccctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccggctactac
ctgaagtcgacggacgagatgtacgccatcgactcctccgacgcctggcaggagggctgc
gccaacacgcgcctgatcgccgagatgatcgacaccaccggcatgttcgagaagcgcgac
ctcatgccgaagttcgacatccccgagggcttcacggagatcacctggttccaggaggag
gtccgccgcggcatggagcgccgcttcccgggcggcgtccccgaggaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccggggtacttcctggtggtc
gccgacttcatcatgtgggccaagaaccagggcatcgcggtcggccccggccgaggctcc
gcggccggctcgatcgtggcctacgcgatgggcatcaccgacctcgaccccatcccgcac
ggcctgatcttcgagcgcttcctgaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgaccgagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggggaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgacccgacgcacccgcgc
tacagcgaggccggcgagatccgctcgatgtacgagagcgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgatctgggtccggcacacggac
ggcgtgaccatcacgcagtgggactacccgcagtgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctcacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggcatcgacctcgacctgctgtcgctgccgctggacgaccccacgaccttcgaa
ctgctccagcgcggcgacacgctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctgcggctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctctac
cgccccggcccgatgggcatggactcgcacaccaactacgcgctgcgcaagaacggcctc
caggagatcacgccgatccacaaggagctggaggagcccctccaggaggtcctcgcggtc
acctacggcctgatcgtctatcaggagcaggtgcagaaggccgcccagatcatcgcgggc
tactcgctcggcgaggccgacatcctgcgccgcgtgatgggcaagaagaagcccgacgaa
ctggcgaagaacttcgtcctcttccaggccggagccaggaagaacggctacagcgacgag
gccatccaggccctgtgggacgtcctggtcccgttcgccggctacgccttcaacaaggcg
cactcggccgcctacggcctggtctcgtactggaccggatacctgaaggcgaactacccg
gccgagtacatggccgccctgctcacctcggtcaaggacgacaaggacaagtcggccgtc
tacctgaacgagtgccggcgcatgggcatcaaggtgctgccgcccaacgtcaacgagtcc
atgtcgaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctccgccgtgcgc
aacgtcggcaccaacgtcgtcgagtcgatcatcaagtgccgcaaggccaaggggaagtac
gcgtccttccccgactacctggacaaggtggaggcggtcgtctgcaacaagcggacgacg
gagtcgctgatcaaggcgggcgccttcgacgagatggggcacacccgcaagggcctcacc
gcgcagtacgaaccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgacgagcagagcgacgagcccggcttcggactc
gacgtggtcttcggcgaggacgagtgggacaagacctatctgctcgcccaggagcgggag
atgctcggtctctacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatctcccagctcaccggcggtgacttcggggacggcgcggtcgtc
accatcggcggcatcatctcgggcctccagcgcaagatgaccaagcagggcaacgcctgg
gccatcgccaccgtcgaggacctggccggctcgctggagtgcatgttcttcccggcgacg
taccagctggtgtccacgcaactggtcgaggacgccgtggtgttcgtcaaggggcgcctc
gacaagcgggaggacgtgccccggctggtcgcgatggagctgatgattcccgacctgtcc
aacgcgggcaccaacgcccccgtcgtcctcaccatcccggcgacccgcatcacgccgccg
atggtcagcaggctcggtgagatcctcacccaccaccggggcgacagcgaggtgcggatc
aagctccaggggcccacgaagacgacggtgctgcgcctggaccggcaccgggtgaagccc
gatccggcgctgttcggcgacctgaaggtgctgctcgggccgtcctgcctggccggctga
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