Streptomyces lividans: SLIV_28580
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Entry
SLIV_28580 CDS
T03222
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slv
Streptomyces lividans
Pathway
slv03030
DNA replication
slv03430
Mismatch repair
slv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SLIV_28580
03430 Mismatch repair
SLIV_28580
03440 Homologous recombination
SLIV_28580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slv03032
]
SLIV_28580
03400 DNA repair and recombination proteins [BR:
slv03400
]
SLIV_28580
Enzymes [BR:
slv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SLIV_28580
DNA replication proteins [BR:
slv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SLIV_28580
DNA repair and recombination proteins [BR:
slv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SLIV_28580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AIJ16624
UniProt:
A0ABN4DZ58
LinkDB
All DBs
Position
complement(6383426..6384412)
Genome browser
AA seq
328 aa
AA seq
DB search
MLEDRTTAAPSATAWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGEVEDHWYTL
VNPQRDPGPVWIHGLTSDVLRDAPLFPDVAEEFAARLDGRVLVAHNAVFDWQMIAREYAR
AEREAPVRQRLCTIALSKALDLPLPNHKLESLAAHFGVVQQRAHHALDDARVLAEAFRPS
LLAAAAGDVRLPLHECRPLTEWSDRPAPRIGQQAGYGSYRPTSWRPSRKRPACPHPNPGR
YEEGKRLKQGMRVAFSGDTSVERDLLEDRAVEAGLHVATSLSRLTSLLVTNDPDSGTSKV
VKARQFGTPVVDEAAFGQLLADVEPADG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccgcacgaccgcagcgccgtccgccacggcgtggccggccgcgtatccc
cagggttacgcggtcgtcgacgtggagaccaccggcctggcccgcgacgaccgcatcatc
tcggcggccgtctaccggctggacgcccgcggcgaggtcgaggaccactggtacaccctg
gtcaatccgcagcgcgatccgggcccggtgtggatacacggtctgaccagcgacgtgctc
cgggacgcaccgctcttcccggacgtcgccgaggagttcgcggcccggctcgacgggcgg
gtcctcgtcgcgcacaacgcggtcttcgactggcagatgatcgcccgtgagtacgcgcgc
gcggagcgcgaggcaccggtgcgtcaacgcctgtgcaccatcgcgctgtccaaggcgctg
gacctgccgctgcccaaccacaagctggagtcgctggccgcgcacttcggcgtcgtgcag
cagcgggcgcaccacgcgctggacgacgcccgggtgctggcggaggcgttccggccgagt
ctgctcgccgcggcggccggggacgtgcggctgccgctgcacgagtgccggccgctgacc
gagtggtcggaccggcccgcgccccggatcgggcagcaggcgggctacgggagctaccgg
ccgaccagttggcgcccttcccgcaaaaggcccgcatgcccccatcccaacccgggccgg
tacgaagagggcaaacggctcaagcagggcatgcgggtcgccttctcgggtgacacctcc
gtcgagcgcgacctgctggaggaccgcgccgtcgaggcgggactgcacgtcgcgaccagt
ctgtcccggctgaccagcctgctggtcaccaacgatccggactcgggcacctccaaggtg
gtcaaggcccgccagttcgggactccggtggtggacgaggcggccttcggacaactgctc
gcggacgtcgagcctgcggacgggtga
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