Parathermosynechococcus lividus: BRW62_06720
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Entry
BRW62_06720 CDS
T05303
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
slw
Parathermosynechococcus lividus
Pathway
slw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BRW62_06720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slw03021
]
BRW62_06720
03400 DNA repair and recombination proteins [BR:
slw03400
]
BRW62_06720
Enzymes [BR:
slw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BRW62_06720
Transcription machinery [BR:
slw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BRW62_06720
DNA repair and recombination proteins [BR:
slw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BRW62_06720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
DUF5887
Motif
Other DBs
NCBI-ProteinID:
ATS18499
UniProt:
A0A2D2Q243
LinkDB
All DBs
Position
1372571..1375903
Genome browser
AA seq
1110 aa
AA seq
DB search
MASNQTYTPPAFTLPDLVEIQRASFRWFLEEGLIEELESFSPITDYTGKIELHFLAKDYK
LKQPKYEVDEAKRRDATYSMQMYVPTRLINKENGNIIDQDVFIGDLPLMTDRGTFIINGA
ERVIVNQIVRSPGVYYKSETDKNGRRTYNASLIPNRGAWLKFETDKNDLLWVRIDKTRKL
SAHVLLKALGLSDSEISERLRHPEYYQKTVEKEGKFTEEDALIELYKKLRPGEPPTVSGG
QQLLESRFFDPKRYDLGRVGRYKLNRKLQLNIPDSVRILTPEDILAAIDYLINLEFDLGS
IDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDTDSLTPASLVNPKPLVAA
IKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPI
ETPEGPNAGLIGSLATHARVNEYGFIETPFYPVKEGRVLKDQPPIYMTADEEDDKRVAPG
DVSTDENGYILGDVVPVRYRQDFTTTTPDQVDYVAVSPVQIISVATSLIPFLEHDDANRA
LMGSNMQRQAVPLLRSHRPLVGTGLEAQAARDSGMVILSQTDGVVTYVDANQIRIKTDNG
GELTYTLQKYQRSNQDTCLNQRPIVFMGDRVRAGQVIADGSATEGGELALGQNILVAYMP
WEGYNYEDAILISERLVQEDVYTSIHIEKYEIEARQTKLGPEEITREVPNVSEDALRQLD
ENGIIRVGAFVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKG
RVVDVRVFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPVQDMP
FLPDGRPVDIVLNPLGVPSRMNVGQVYECLLGWAGECLGRRFKITPFDEMHGKEKSRETV
HAKLQEAKEKVGQDWVFNPADPGKMVVYDGRTGEPFDRPVTVGMAYMLKLVHLVDDKIHA
RSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYILQELLTVKSDDMQGRNEAL
NAIVKGQSIPRPGTPESFKVLMRELQSLCLDISVRKSSIPSFDDDGETKPDPEVDLMVDV
SPRRTPVRPTIEFESLQGDDFEEKDSVTTP
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atggctagtaaccagacttacacgccacccgcttttaccttgccagaccttgtcgagatt
cagcgggccagcttccgatggtttcttgaagaagggctaattgaagaactagagagtttc
tcacctattacggattatacgggcaaaattgagctgcacttcttagccaaagactacaaa
ctgaagcagcccaagtatgaagtagatgaggccaaacgtcgggatgccacctattcaatg
caaatgtacgtcccgacccgtttgattaacaaagaaaacggcaacattattgatcaggat
gtcttcattggggatctgcccctgatgaccgaccgtggcacatttattatcaatggtgct
gagcgggtcattgtcaaccaaattgtgcgcagccccggtgtctattacaagtctgaaacg
gacaaaaatgggcgccgcacctataatgccagccttattcctaaccgcggagcatggcta
aaatttgagaccgataaaaatgacctcctgtgggtgcgcattgacaaaacccgtaaacta
tcggctcacgtgcttctcaaagccttgggcttaagtgacagcgaaattagcgaacggcta
cgtcaccctgagtactaccaaaaaaccgttgaaaaagagggtaaattcaccgaagaagat
gccctcattgagctatacaaaaaactgcgccccggggagccacccaccgtttctggcggt
cagcagttacttgagtcccgtttctttgaccccaagcgctacgatcttggccgtgtgggt
cgctataagctcaaccgcaagctgcaactgaatatccctgactcggtgcggattctcacc
ccagaggatattttggcggccattgactatctcattaacttggaatttgaccttggtagt
attgacgacattgaccacttagggaaccgtcgggttcgctcggtgggagaactgctccag
aaccaagtgcgagtgggcttgaaccgcctcgagcggattattcgcgaacggatgacggtt
tccgataccgattccttgacccctgcttcgttggtgaatcccaagcccctagtggcggca
attaaggagttctttggctccagtcaactgtcgcagttcatggatcaaaccaatccccta
gcagagctaacccacaaacggcgcttgagtgccctaggtccaggtgggctgacacgggag
cgcgctggttttgcggtacgggatattcaccccagccactatggtcgcatctgcccgatc
gaaaccccggaaggccctaacgccggtctaattggctccttggccacccatgcccgggtc
aatgagtacgggtttattgaaacgcccttctatccggtgaaagagggacgagtcctcaaa
gatcagccccccatttacatgacggcagacgaagaggatgataagcgggtggcacccgga
gatgtctccaccgacgaaaacggctacatccttggggatgtggtacctgtgcgctatcgc
caagactttaccaccaccacacccgatcaggtggactatgtggcagtctcgccagtgcaa
attatttcagtggccacttccctgattcccttccttgagcacgatgacgccaaccgcgct
ctgatggggtctaacatgcagcggcaagcggttcccctgctgcgatcgcaccgtcccttg
gtgggtaccggcttggaggcgcaagctgcccgtgactcggggatggtcatcctcagtcaa
acggatggggtcgtgacctatgtggatgccaaccaaatccgcatcaaaaccgacaacggc
ggcgagctaacctacaccttgcaaaaataccaacgctccaaccaagacacctgtttgaat
caacgccccattgtcttcatgggcgatcgcgtccgtgcaggtcaagtcattgccgatgga
tcagccaccgagggaggcgagctggccttggggcaaaacattcttgtggcctacatgcca
tgggaaggctacaactacgaagatgccatcctcatcagcgagcggttggtgcaggaggat
gtctatacctccattcacattgaaaaatacgaaatcgaggcgcggcaaaccaaacttggc
cccgaagaaattacccgcgaagtccccaatgtctcagaagatgccctgcggcaactggac
gaaaacggcattatccgcgtcggcgcgtttgttgaagcgggggatattctggtgggcaaa
gttacccccaaaggcgagtcggatcaaccaccggaggaaaaactgctgcgagccattttt
ggtgaaaaagcacgggatgtccgggataactccctacgggtacccaacggtgaaaaaggc
cgtgtcgttgatgtgcgcgtctttacccgcgagcagggagatgaactgcccccgggcgcc
aatatggtggtgcgggtctatgtggctcaaaaacgcaaaatccaagtcggcgataagatg
gcgggtcgccacggtaacaaagggattatttctcgaattctaccggtgcaagatatgccc
tttttaccagatggtcgcccggtagatattgtcctcaatcccttgggggtgccctcgcgg
atgaacgtcggccaagtttatgagtgcttgctgggctgggcgggtgaatgtttagggcgg
cgctttaagatcaccccctttgacgaaatgcacggcaaggaaaaatctcgcgaaaccgtg
catgccaaactgcaagaagccaaagaaaaagtaggtcaagattgggtctttaatcctgcg
gatccgggcaaaatggtggtctatgatggccgcaccggtgaacccttcgatcgccccgtc
acggtggggatggcctacatgctcaagctagtgcacttagtcgatgacaagattcatgcc
cgctcaactggcccctactccctcgtgacccagcaaccccttggtggcaaagcacagcag
ggagggcaacgctttggcgaaatggaagtatgggcactggaagcctacggcgccgcctat
attctgcaagaactgctcaccgttaaatctgacgatatgcaggggcgcaatgaagccctc
aacgccatcgtcaaaggtcaatccattccgcgaccgggcaccccagagtcctttaaggtg
ctgatgcgggagttgcaatccctgtgtctggatatttctgtgcgtaagtccagtattccc
agctttgatgacgatggcgagaccaagccagaccccgaagtggatctgatggtggatgtc
agtccacggcgtacccctgtgcgtcccacaatcgaatttgagtccttgcaaggggatgac
tttgaagaaaaagacagtgtcaccactccctag
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