Parathermosynechococcus lividus: BRW62_08025
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Entry
BRW62_08025 CDS
T05303
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
slw
Parathermosynechococcus lividus
Pathway
slw03420
Nucleotide excision repair
slw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BRW62_08025
03430 Mismatch repair
BRW62_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slw03400
]
BRW62_08025
Enzymes [BR:
slw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRW62_08025
DNA repair and recombination proteins [BR:
slw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRW62_08025
MMR (mismatch excision repair)
Other MMR factors
BRW62_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
DEAD
Viral_helicase1
AAA_11
ResIII
PcrA_UvrD_tudor
NPHP3_N
Terminase_6N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATS18706
UniProt:
A0A2D2Q2J1
LinkDB
All DBs
Position
complement(1647369..1649669)
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AA seq
766 aa
AA seq
DB search
MSDFLAGLNPCQKRAVQHYCGPMLVVAGAGSGKTRTLTYRIAHLIQQHQVDPANILAVTF
TNKAAREMKERLEQLFAQQIAYQLCQRDWLDLSPLEQKRVRSQVYHTYTKPLWIGTFHSL
CARLLRHDVETYTHPQGYRWTRNFTIFDESDVQSLIKEIVISELNLDERKNDPRGIRYKI
SNAKNRGLTPDQLENETRSPATRIAAEVYRRYEAALARHNALDFDDLILLTVHLFQQQPR
VLEHWHQQFQHILVDEYQDTNRTQYDLIRLLATNGTPPQQFQGWQERSIFVVGDVDQSIY
SFRCADFTILMNFQRDFGDGLADDDSRTMIKLEENYRSVANILEAANYLIEHNSERIDKV
LRPTKPAGPPIHCECTATETEEAYFVAEKIKALSGDRLEPAWGRFAILYRTNAQSRPFED
VLVRANIPYTVVGGLKFYDRKEIKDLLAYLRLLQNPHDSVSLRRIINVPKRGIGKTTLDR
LGNAAQTLRLPLWQLICDPESMMPLAGRASRALQQFVNLVQKLQSLVDDISLPDLVKAVI
EETGYRRELENDGTDESLERLQNLAELVNAAQQFSEENDGATLSEFLNSAALASDLDTVD
EGSGVVSLMTLHAAKGLEFPVVFLVGLEQGLFPNYRSLNDPLTLEEERRLCYVGITRAQE
QLFLTFAQSRRLYGRSEDAIPSQFLSELPPELLTGAALRRRLGKITSQRSQQWRVGDRLI
HPLYGTGEVSHIFNMGRRVSLAIRFPGRGQKVVDPTITPLERLSSG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttcctagccggtctgaacccctgccaaaagcgagcggtacaacactactgc
ggcccaatgctggtagtggcgggggcaggatctggcaaaacccggacgctgacctaccgt
attgcccatttaattcaacagcatcaagttgatcctgccaatattcttgcggtgaccttt
acaaataaagctgctcgggaaatgaaggaacggcttgagcagctttttgcccaacagata
gcctatcagttgtgccagcgagattggcttgacctgtcgcccctagagcaaaaacgggtg
cgatcgcaggtctatcacacctatactaaaccgctttggattggcaccttccatagcctt
tgtgcccgcctcctgcgacatgacgtggaaacctacacgcatccccaaggctaccgctgg
actcgcaacttcacaattttcgatgaatcggatgtccaaagtttgatcaaggaaattgtg
atcagtgagttaaatttagacgagcgaaaaaacgatccacgggggattcgctacaaaatt
agcaatgccaaaaaccgcggcttaacgccggatcaactagagaacgagacgcgatcgcca
gcaactcgcatcgcggctgaagtctatcgccgttacgaggcggcgcttgcccgtcacaat
gccttagattttgacgatttaattttgctgacggtgcatctatttcagcagcaaccccgt
gtcttagagcactggcatcagcaatttcagcacattttagtggatgagtaccaagatacc
aatcggacccagtatgatctcattcgccttttagccaccaatggtacccctccccagcag
ttccaaggctggcaggagcgctccatctttgtggtgggggatgtggatcagtccatttac
tcgttccgatgtgctgatttcacaattttgatgaacttccagcgggattttggtgatggt
ttggcggacgatgacagccgcaccatgattaagttggaggaaaattatcgctcggtggcc
aatatcctagaggcggccaactacctgattgagcacaatagcgaacggattgataaagtg
ctacgccccaccaaacctgcgggcccccccattcactgtgagtgcactgcaacggaaacc
gaggaagcatattttgtcgccgaaaaaattaaagccctcagtggcgatcgcctcgagcca
gcgtgggggcgctttgccattttgtaccgcactaatgcccaatcccgcccctttgaggat
gttcttgtccgcgctaatattccctacaccgtagtcggcggcttaaagttttacgatcgc
aaagaaattaaggatcttttggcctacctccgcttgctgcaaaacccccacgatagcgtg
agcctgcggcgaattattaatgtgcccaagcgcggcattggcaaaacaacccttgatcgc
ctaggaaatgcagcccaaaccctacggttacccctgtggcaactcatttgcgatccagag
tcaatgatgcccttggcggggcgagccagtcgtgccctgcaacagttcgttaacttagtg
caaaaattacaatcccttgtggatgacattagcctaccggacttggttaaagccgtcatc
gaggagacgggctaccgccgcgaacttgagaatgacggcaccgatgaaagccttgagcgt
ttgcaaaatttagctgagctagtgaacgcggcacagcagttcagcgaagaaaacgatggc
gcaaccctgagcgagtttctcaacagtgcagccttagcctcagatctcgatactgttgac
gaaggttctggggtggtttccttaatgacgttgcatgctgccaaagggttagagtttccg
gttgtgtttttagtgggactagagcaagggctgttccctaactaccgtagcctcaacgat
cccctcaccctcgaagaagagcgtcgcctctgctatgtggggattacccgcgcccaagag
caacttttccttacttttgcccaaagccgtcgcctctacggcagaagtgaggatgccatt
ccctctcagttcctgagtgaactaccgccggaactccttaccggggcggccttacgtcgt
cgcctaggtaaaatcacctcccagcgttcccagcaatggcgagtgggcgatcgccttatt
catccgctttacggtaccggggaagtcagtcatatttttaacatgggtcgcagggtgtct
cttgcaattcgctttccaggacggggtcaaaaggtggttgaccccacgattacccccctt
gaacggctcagctctggttaa
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