Parathermosynechococcus lividus: BRW62_09860
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Entry
BRW62_09860 CDS
T05303
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slw
Parathermosynechococcus lividus
Pathway
slw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BRW62_09860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slw03019
]
BRW62_09860
03400 DNA repair and recombination proteins [BR:
slw03400
]
BRW62_09860
Enzymes [BR:
slw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BRW62_09860
Messenger RNA biogenesis [BR:
slw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BRW62_09860
DNA repair and recombination proteins [BR:
slw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BRW62_09860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
ATS18996
UniProt:
A0A2D2Q3B7
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All DBs
Position
complement(2088405..2089844)
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AA seq
479 aa
AA seq
DB search
MSEVTLAQVHQALQRYWGYTALRSPQGDVITALLERRDVVVVLPTGAGKSLCFQLPALLQ
EGITLVISPLLALMENQVADLRQRGLKAAAYHSELSTYQRRQVLRQVEQQQLRLLYLSPE
SLFSSAVWQCLCAPALRLNGLIVDEAHCLVQWGDRFRPSYRRLGTVRPEIARLKPEHPRI
GLAAFTATADPSSQRVLIEVLGLDTPAQIRHSPYRPNLHLRVHSVWSRGYRRHCLRHFVQ
QKGRTSGLIYARTRRDTETLAAWLQHHGYTTAAYHGGLPAPERRRIETAWLQGTLPFVIC
TSAFGMGVNKPDVRWICHYQPPLQLSEYLQEVGRAGRDGQPAVALTLVSDRWGLDRDDQQ
RWQFFERQSQDIQRQAMAQATKLPRQGNLNALRSTVANLELTLALLHQQGALQWQDPFHF
QLRQIAPNVVPPNREDPESRRMQEFLRYKGCRWQFLLRAFGFTQEAQTCRCGHCDRCNS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaggtgactttggcgcaagtccaccaagcactacaacgctactggggctacacc
gctttgcgatcgcctcagggggatgtgatcactgcactgctagagcggcgagatgtggtg
gtcgtgctgccgactggtgcaggcaagagtctatgctttcagctcccagcattgctccag
gaagggatcacccttgtgatttctccgttgctggctcttatggaaaaccaagtggcagac
ctgcggcagcggggtctgaaggcagcggcctaccacagcgagttatcgacctaccagcga
cggcaggtgttacggcaggttgagcagcagcagttgcggttactctatctttcgccggag
tctctctttagttctgcggtgtggcaatgcctgtgcgccccagccttgcggctaaatggc
ttaattgtggatgaagcccattgccttgttcagtggggcgatcgctttcgcccaagctat
cggcgcttaggcaccgttcggccggaaattgcccgcctcaaacccgagcacccccgtatt
ggccttgcggcttttaccgccaccgctgatcccagcagccagcgcgtcctcatcgaggtt
ttgggcttagacacgccagcgcagatccggcacagcccctaccgccccaatctgcacctg
cgggtacacagcgtctggagtcgagggtaccgccgccactgtttacgccactttgtccag
cagaaggggcgcacctcaggtttgatctatgcccgcacccgccgcgacacagaaaccctc
gcagcatggttgcagcaccacggatataccaccgccgcttaccatggcggcctgcccgca
ccggagcgtcgccgcattgaaaccgcttggctgcagggcaccctaccctttgtgatctgc
accagtgcctttggtatgggggtgaacaaaccggatgtgcgctggatttgccactatcaa
cctcccctacaactcagtgaatacctccaagaagtggggcgcgccggtcgtgatggccaa
ccggcagtggcgctgaccttggtgagcgatcgctggggactagatcgcgacgatcagcaa
cggtggcagtttttcgagcgccagagccaagacattcagcggcaggccatggcacaagcc
acaaaacttcctcgccaaggcaacctgaatgcgctgcgatcaaccgttgccaatttggag
ctgacccttgccttgctccaccaacagggggcactccagtggcaggatccgtttcatttc
caactgcggcaaattgcccccaatgttgtgccccccaaccgcgaggatcctgaaagccgc
cgtatgcaggagtttcttaggtataaaggctgtcgttggcagttcctactgcgcgccttt
ggatttacccaagaagcccaaacctgccgctgtggccactgcgatcgctgcaatagctag
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