Streptomyces lavendulae subsp. lavendulae: SLAV_06285
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Entry
SLAV_06285 CDS
T05314
Symbol
fpg1
Name
(GenBank) putative formamidopyrimidine-DNA glycosylase-like protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SLAV_06285 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_06285 (fpg1)
Enzymes [BR:
slx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SLAV_06285 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SLAV_06285 (fpg1)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SLAV_06285 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
NFACT_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-ProteinID:
ATZ23162
UniProt:
A0A2K8P8U2
LinkDB
All DBs
Position
complement(1402833..1403693)
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AA seq
286 aa
AA seq
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MPELPEVEALRGFLEERLTGRVVRRVLPLAVSVLKTYDPPLTALEGGRAGPVARYGKFLD
LGVGDLHLVTHLARAGWLRWHDTFPARPPGPGKGPLALRVELEEGGGFDLTEAGTQKRLA
VYVVRDPREVPGIARLGPDPLAEGFDRDAFAALLAGERRQIKGVLRDQSVIAGIGNAYSD
EILHTARVSPFKLAASFDEDQVTHLYRAVEDTLRTAVERARGVAAGQLKAEKKSGLQVHG
RAGEPCPVCGDTVRSVSFADSSLQYCPTCQTGGKPLADRRLSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgccggaggtcgaggccctgcggggcttcctcgaagaacgcctcaccggg
cgggtggtgcgacgcgtcctcccgctggccgtcagcgtgctcaagacctacgatcccccg
ctcacggccctcgaaggcgggcgggccggacccgtcgcccggtacggcaagttcctcgac
ctcggcgtcggcgacctccacctggtcacccacctggcccgagccggctggctgcgctgg
cacgacacctttccggcccggccgcccggtcccggcaaggggccgctcgcgctccgcgtc
gaactggaggagggcggcggcttcgacctcaccgaggcgggcacccagaagcgcctcgcc
gtgtacgtcgtgcgcgacccccgggaggtccccggcatcgcccggctcggccccgacccg
ctcgcggagggcttcgaccgggacgccttcgcggcgctcctggcgggggagcgccggcag
atcaagggcgtgctgcgcgaccagagcgtcatcgcgggcatcggcaacgcctacagcgac
gagatcctgcacacggcccgcgtctcccccttcaaactggccgcctccttcgacgaggac
caggtcacccacctctaccgggcggtcgaggacacgctccgcacggccgtggagcgggcc
cgcggcgtggccgccgggcagctcaaggccgagaagaagagcgggctgcaggtccacggc
cgggcgggggagccgtgcccggtgtgcggggacaccgtccgctcggtgtccttcgccgac
tcctcgctccagtactgccccacctgccagacgggcggcaagccgctcgccgaccgcagg
ctctcgcgtctcctcaagtag
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