Streptomyces lavendulae subsp. lavendulae: SLAV_10820
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Entry
SLAV_10820 CDS
T05314
Symbol
recQ1
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLAV_10820 (recQ1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slx03019
]
SLAV_10820 (recQ1)
03400 DNA repair and recombination proteins [BR:
slx03400
]
SLAV_10820 (recQ1)
Enzymes [BR:
slx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SLAV_10820 (recQ1)
Messenger RNA biogenesis [BR:
slx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SLAV_10820 (recQ1)
DNA repair and recombination proteins [BR:
slx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SLAV_10820 (recQ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
KORA
Motif
Other DBs
NCBI-ProteinID:
ATZ24032
UniProt:
A0A2K8PBB0
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All DBs
Position
2577815..2579974
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AA seq
719 aa
AA seq
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MNADLRSSADSVLARLVGDPTGTARLREDQWRAIEALVAHKRRALVVQRTGWGKSAVYFV
ATSLLRASGAGPTVIVSPLLALMRNQVEAAARAGIRARTINSANPEEWEGIQAEVAAGEV
DVLLVSPERLNNPDFRDQVLPKLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTMLADLP
PGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLAVLTLPDAAHRLAW
LADHLADLPGSGIIYTLTVAAAEEVTAYLRHRGHTVSSYTGKTENADREQAENDLQANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGREDEAI
WQYFASVAFPPEEQVRRTLDVLAQAGRPLSLPALEPLVDLRRTRLETMLKVLDVDGAVHR
VKGGWTSTGEPWVYDAERYAWVARQRSAEQQAMRDYAASTGCRMEFLRRQLDDEEAAPCG
RCDNCAGARFTADVSGTSLDTARGELSRPGVELEPRKMWPTGLAAVGVDLKGRIPAGEQA
STGRALGRLSDIGWGNRLRPMLAPQTADQPVPDDVAQAVVAVLADWARGPGGWATGAADA
PARPVGVVALPSRSRPLLVGSLAARIAEVGRIPLLGTLEYTDQAPEFGLPSSNSAQRVRG
LHQALTVPQALAASLSETSGPVFLVDDRAESGWTLAVAARLLRRAGAKGVFPLVLALQP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcagacctgaggtcctccgccgattccgtactcgcccgcctcgtgggcgacccc
acgggcaccgcacggctgcgcgaggaccagtggcgggcgatcgaggccctcgtcgcgcac
aagcggcgagccctggtcgtccagcgcacggggtggggcaagtccgccgtgtacttcgtg
gccacttccctgctgcgggcgagcggtgccggccccaccgtcatcgtctcccccctgctc
gcgctgatgcgcaatcaggtcgaagccgccgcccgggccggaatccgcgcccgcaccatc
aactccgccaatcctgaggagtgggagggcatccaggccgaggtcgctgcgggcgaggtc
gacgtcctcctggtcagccccgagcgcctcaacaaccccgacttccgcgaccaggtgctc
cccaagctcgcggccgccaccggcctcctggtggtcgacgaggcccactgcatctccgac
tggggacacgacttccgccccgactaccgccggctgcgcaccatgctggccgatctcccg
ccgggagtcccggtcctcgcgacgaccgccaccgccaacgcccgggtgacggcggacgtc
gcagagcagctcggcaccggagccggtacggacgccctcgtactgcgcggcccgctggac
cgcgagagcctgagcctggccgtgctgaccctgcccgacgccgctcaccggctcgcctgg
ctcgccgaccacctcgccgacctgccgggctccgggatcatctacacgctgacggtggcc
gccgccgaggaggtcaccgcctacctccgccaccgcggccacaccgtctcctcgtacacc
ggcaagaccgagaacgccgaccgcgagcaggcggagaacgacctccaggccaaccgcgtc
aaggccctcgtggccacctccgcgctcgggatgggcttcgacaagcccgacctcggcttc
gtcgtgcacctgggatcgccctcctcccccatcgcctactaccagcaggtcggccgtgcg
ggccgcggtgtggagcacgccgaggtgctcctgctgcccggccgcgaggacgaggcgatc
tggcagtacttcgcctcggtggccttcccgccggaggagcaggtccgccgcaccctcgac
gtcctggcccaggcggggcgccccctctccctgcccgccctggaaccgctcgtcgacctg
cgccgcacacgcctggagacgatgctgaaggtcctcgacgtggacggcgccgtccaccgc
gtcaagggcggctggacctccaccggcgagccgtgggtgtacgacgccgaacgctacgcc
tgggtcgcccggcagcggtccgccgaacagcaggcgatgcgggactacgccgcctccacc
ggctgccggatggagttcctgcgccgccagctggacgacgaggaggccgcgccctgcggc
cgctgcgacaactgcgcgggcgcccgcttcacggcggacgtctccggcacctccctggac
accgcccgcggcgaactgagccgtcctggcgtggaactggagccccgcaagatgtggccg
accgggctcgccgcggtcggcgtcgacctcaagggccggatcccggccggggaacaggcc
tccaccggccgggccctgggcagactgtccgacatcggctggggcaaccgcctgcgtccg
atgctcgccccgcagacggccgaccagccggttccggacgatgtcgcccaagccgtggtc
gccgtactcgccgactgggcacgtggaccggggggttgggccaccggcgcggcggacgcc
cccgcccggcccgtgggtgtggtggcgctgccttcgcggagccgccccctgctggtcggc
tccctcgccgcccggatcgccgaggtcgggcggatcccgctgctcggaaccctggagtac
accgatcaggcaccggagttcgggctgccgtcctccaacagtgcccagcgggtccgggga
ctccaccaggccttgaccgtcccacaggccctggcggccagcctgtccgagacatcgggt
ccggtgttcctcgtcgacgaccgggcggagagcgggtggaccctcgcggtggccgcccgg
ctgctccgccgggcgggtgcgaagggggtgtttccgctggtgctcgcgctccagccgtag
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