KEGG   Streptomyces lavendulae subsp. lavendulae: SLAV_10880
Entry
SLAV_10880        CDS       T05314                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
slx  Streptomyces lavendulae subsp. lavendulae
Pathway
slx00230  Purine metabolism
slx00240  Pyrimidine metabolism
slx01100  Metabolic pathways
slx01232  Nucleotide metabolism
Module
slx_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
slx_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:slx00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SLAV_10880 (nrdJ)
   00240 Pyrimidine metabolism
    SLAV_10880 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:slx03400]
    SLAV_10880 (nrdJ)
Enzymes [BR:slx01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SLAV_10880 (nrdJ)
DNA repair and recombination proteins [BR:slx03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SLAV_10880 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N MqsR_toxin Ribonuc_red_lgN RuvA_C ATG101
Other DBs
NCBI-ProteinID: ATZ24044
UniProt: A0A2K8PBC9
LinkDB
Position
complement(2589288..2592185)
AA seq 965 aa
MTETASGSARGSRTKGTKAAKGGLRIERIHTTPGVHPYDEVSWELRDVVMTNWRDGSVNF
EQRGVEFPDFWSVNAVNIVTSKYFRGAVGTPQRETGLKQLIDRIVKTYTKAGEENDYFAS
PADVEIFEHELTYALLHQIFSFNSPVWFNVGTPQPQQVSACFILAVDDSMESILDWYKEE
GMIFKGGSGAGLNLSRIRSSKELLSSGGNASGPVSFMRGADASAGTIKSGGATRRAAKMV
VLDVDHPDVEAFIETKVKEEEKIRALRDAGFDMDLGGDDITSVQYQNANNSVRVNDEFMA
AVENGTEFGLRARMTGEVIEKVDAKALFRKLAEAAWACADPGIQYDGVINNWHTCPESGR
ITASNPCSEYMHLDNTSCNLASLNLMKFLDDDGKGNQSFDAERFAKVVELVITAMDISIC
FADFPTQKIGENTRAFRQLGIGYANLGALLMATGHAYDSDGGRTLAASITSLMTGTAYKR
SAELAAIVGPYDGYARNADSHKRVMKQHADANAVAPRTEDLDNVIWAAATEAWQDVLRLG
EKNGFRNSQASVLAPTGTIGLAMSCDTTGVEPDLALVKFKKLVGGGSMQIVNGTVPQALR
RLGYQEEQIEAIVAHIAEHGVVVDAPGLKTEHYEVFDCAMGERSISAMGHVRMMAAIQPW
ISGAISKTVNMPETATVEEIEEIYFEAWKMGVKALAIYRDNCKVGQPLSAKKKEEEKAEI
TEKAEETIRTAVEKVIEYRPVRKRLPKGRPGITTSFTVGGAEGYMTANSYPDDGLGEVFL
KMSKQGSTLAGMMDAFSIAVSVGLQYGVPLETYVAKFTNMRFEPAGMTDDPDVRMAQSIV
DYIFRRVALDFLPFETRSALGIHSAEERQRHLDTGSYEPLEDEELDTEALAQSAPLASVP
AASAPKPVEIVPVPAPKTAHSNAELVEMQLGVSADAPLCFSCGTKMQRAGSCYICEGCGS
TSGCS
NT seq 2898 nt   +upstreamnt  +downstreamnt
atgacagagacggcgagcggctcggcgcgaggttcccgcaccaaggggaccaaggctgcc
aagggcggcctgcggatcgagcgcatccacaccaccccgggcgtgcacccgtacgacgag
gtcagctgggagctccgtgacgtcgtcatgaccaactggcgcgacggctcggtcaacttc
gagcagcgtggcgtcgagttccccgacttctggtcggtgaacgcggtcaacatcgtcacc
agcaagtacttccgcggcgcggtcggcaccccgcagcgtgagaccggtctgaagcagctc
atcgaccggatcgtgaagacgtatacgaaggccggcgaggagaacgactacttcgcgtcc
cccgccgacgtggagatcttcgagcacgagctgacctacgccctcctgcaccagatcttc
agcttcaactcgccggtgtggttcaacgtcggtacgccccagccgcagcaggtctccgcc
tgcttcatcctggccgtcgacgactccatggagtcgatcctcgactggtacaaggaagag
ggcatgatcttcaagggcggctccggcgccggcctgaacctctcccgcatccgctcctcc
aaggaactcctctcctccggcggcaacgcctccggtccggtctccttcatgcgcggcgcc
gacgcgtccgccggaacgatcaagtcgggtggcgccacccgccgcgcggccaagatggtc
gtcctggacgtggaccacccggacgtcgaggccttcatcgagaccaaggtgaaggaagag
gagaagatccgcgccctgcgcgacgcgggcttcgacatggacctgggcggcgacgacatc
acgtccgtccagtaccagaacgccaacaactccgtccgcgtgaacgacgagttcatggcg
gccgtcgagaacggcaccgagttcggcctccgggcccgcatgaccggcgaggtcatcgag
aaggtcgacgccaaggcgctcttccgcaagctcgccgaggccgcgtgggcctgtgccgac
ccgggcatccagtacgacggtgtgatcaacaactggcacacctgccccgagtccggccgc
atcaccgcgtccaacccgtgcagcgagtacatgcacctggacaacacgtcctgcaacctc
gcctcgctcaacctgatgaagttcctcgacgacgacggcaagggcaaccagtccttcgac
gccgagcgcttcgccaaggtcgtcgagctggtcatcaccgcgatggacatctccatctgc
ttcgcggacttcccgacgcagaagatcggcgagaacacccgcgccttccgccagctgggc
atcggctacgccaacctcggcgccctcctgatggcgaccggccacgcgtacgactcggac
ggcggccgcaccctcgccgcctcgatcacctcgctgatgaccggtaccgcgtacaagcgc
tccgccgagctggccgccatcgtcggcccgtacgacggttacgcccgcaacgccgactcg
cacaagcgcgtcatgaagcagcacgccgacgccaacgccgtcgcgccgcgcaccgaagac
ctcgacaacgtgatctgggccgcggccaccgaggcctggcaggacgtcctgcgcctcggc
gagaagaacggcttccgcaactcccaggcctccgtcctcgcgccgaccggcaccatcggt
ctcgcgatgtcctgcgacaccaccggtgtcgagccggacctggccctggtcaagttcaag
aagctcgtcggcggcggctcgatgcagatcgtcaacggcaccgtcccgcaggccctgcgc
cgcctgggctaccaggaggagcagatcgaggcgatcgtcgcgcacatcgccgagcacggc
gtggtcgtcgacgccccgggtctgaagaccgagcactacgaggtcttcgactgcgccatg
ggcgagcgttccatctccgcgatgggccacgtccgcatgatggccgcgatccagccctgg
atctccggggcgatctccaagacggtcaacatgccggagacggcgaccgtcgaggagatc
gaggagatctacttcgaggcgtggaagatgggcgtcaaggcgctcgcgatctaccgcgac
aactgcaaggtcggccagcccctctccgccaagaagaaggaggaggagaaggccgagatc
accgagaaggccgaggagaccatccgcacggcggtcgagaaggtcatcgagtaccgcccg
gtccgcaagcgcctccccaagggccgcccggggatcaccacctccttcacggtcggtggc
gccgagggctacatgacggcgaactcctacccggacgacggtctgggcgaggtcttcctg
aagatgtccaagcagggttcgaccctcgcgggcatgatggacgccttctccatcgccgtc
tccgtcggtctgcagtacggcgtcccgctggagacgtacgtcgcgaagttcaccaacatg
cggttcgagccggccggtatgacggacgacccggacgtgcggatggcgcagtcgatcgtc
gactacatcttccgtcgcgtggcgctggacttcctgcccttcgagacccggtcggccctc
ggcatccactccgccgaggagcgtcagcgccacctcgacaccggctcctacgagccgctg
gaggacgaggagctcgacaccgaggccctcgcccagtcggcgccgctcgcgtcggtcccg
gccgcttccgccccgaagccggtcgagatcgttcccgtcccggccccgaagacggcgcac
tccaacgccgaactggtcgagatgcagctcggcgtctccgccgacgccccgctctgcttc
tcctgcggtacgaagatgcagcgcgccggctcctgctacatctgcgagggctgcggctcg
accagcggttgcagctga

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