Streptomyces lavendulae subsp. lavendulae: SLAV_11180
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Entry
SLAV_11180 CDS
T05314
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slx03009
]
SLAV_11180 (rimO)
Enzymes [BR:
slx01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SLAV_11180 (rimO)
Ribosome biogenesis [BR:
slx03009
]
Prokaryotic type
ribosomal protein modification factors
SLAV_11180 (rimO)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Mur_ligase_C
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
ATZ24104
UniProt:
A0A2K8PBI8
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All DBs
Position
complement(2661914..2663407)
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AA seq
497 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEDAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGKTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISDRLQTIL
NGGIHASHTPRDRRKLLPISPAARQDTAVALPGHAQEPEAAPADLPEGLAPASGPRAPLR
RRLDKSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEIMLVS
ENNTSYGKDLGDIRLLETLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKVVPYF
DLSFQHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGETESDFAELE
RFLTHARLDAIGVFGYSDEDGTEAVGYENKLDEDTIAERLAHMQRLAEELTSQRAEERIG
ETLEVLVETVVPLDEAEEGEGAYGRAAHQAPETDGQVVFTDGAGLVPGRIVTAKVVGTLG
VDLVAEPLDLEFEEEAG
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggatggctgggagctcgtcgaggacgccgcc
gacgcggacgtagccgtcgtcaacacctgtggcttcgtcgaagccgccaagaaggactcc
gtagacgccctgctggaagccaacgatctcaaggatcacggcaagacccaggccgtcgtc
gccgtcggctgtatggccgagcgctacggcaaggaactcgccgaagcgctccccgaggcc
gacggagtcctcggcttcgacgactacgccgacatctccgaccgcctccagacgatcctc
aacgggggcatccacgcctcccacaccccgcgcgaccggcgcaagctgctgccgatcagc
ccggcggcacgccaggacaccgcggtggccctgcccggacacgcccaggagcccgaggcg
gcccccgcggacctccccgagggcctcgcgcccgcctccggtccgcgcgccccgctgcgc
cgccgcctggacaagagcccggtcgcctcggtcaagctggcctccggctgcgaccgccgc
tgctccttctgcgccatcccgtccttccgcggctccttcatctcgcgccgtcccagcgac
gtgctgggcgagacgcgctggctggccgagcagggcgtcaaggagatcatgctggtctcc
gagaacaacacctcgtacggcaaggacctcggcgacatccgcctgctggagaccctgctg
cccgagctggccgaggtggacggcatcgagcgcgtccgcgtcagctacctccagccggcc
gagatgcggcccggcctgatcgacgtgctcacctcgacccccaaggtcgtgccgtacttc
gacctgtccttccagcactcggcccccgacgtgctgcgcgccatgcgccgcttcggtgac
accgaccgcttcctggagctgctggacaccatccgctccaaggccccgcaggccggcgtg
cgctccaacttcatcgtcggcttccccggcgagacggagtcggacttcgccgagctggag
cgtttcctcacccacgcccgcctcgacgccatcggcgtcttcggctactccgacgaggac
ggcaccgaggccgtcggctacgagaacaagctggacgaggacaccatcgccgagcgcctc
gcgcacatgcagcgcctcgccgaggagctcacctcccagcgtgcggaagagcggatcggg
gagaccctggaggtgctcgtcgagacggtcgtgccgctggacgaggccgaggagggcgag
ggcgcgtacggccgcgccgcccaccaggcccccgagacggacggccaggtggtcttcacg
gacggcgccggcctggtgccggggcgtatcgtcacggccaaggtggtcggaacgctgggt
gtggacctggtggcggagcccctggacctggagttcgaggaggaggccggatga
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