Streptomyces lavendulae subsp. lavendulae: SLAV_11270
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Entry
SLAV_11270 CDS
T05314
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Pathway
slx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SLAV_11270 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slx03019
]
SLAV_11270 (pnp)
03016 Transfer RNA biogenesis [BR:
slx03016
]
SLAV_11270 (pnp)
Enzymes [BR:
slx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SLAV_11270 (pnp)
Messenger RNA biogenesis [BR:
slx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SLAV_11270 (pnp)
Transfer RNA biogenesis [BR:
slx03016
]
Prokaryotic type
tRNA degradation factors
SLAV_11270 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_PNO1_2nd
KH_KhpA-B
PCB_OB
KH_2
Motif
Other DBs
NCBI-ProteinID:
ATZ24118
UniProt:
A0A2K8PCD2
LinkDB
All DBs
Position
complement(2690242..2692479)
Genome browser
AA seq
745 aa
AA seq
DB search
MEKTLVENETHYAEAVIDNGSFGTRTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASK
KPKDQLDFFPLTVDVEERQYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLR
NEIQVVATVMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHT
ELEDAVFDMVVAGRTLEDGDVAIMMVEAEATEQTIALVKGGAEAPTEEIVASGLEAAKPF
IKVLCKAQADLAAKAAKPEGEFPVFLDYQDDVYEALAAAVKGDLSQALTIAGKQDREAEL
DRVKDIAAEKLLPAFEGREKEISAAYRSLTKALVRERVIKDKVRIDGRGLTDIRTLAAEV
EAIPRVHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSVGETG
RVGSPKRREIGHGALAERAIVPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLL
NAGVPLKAPVAGIAMGLISQEIDGKTHYVALTDILGAEDAFGDMDFKVAGTKEFVTALQL
DTKLDGIPASVLAAALTQARDARLHILDVMMEAIDTPDAMSPFAPRIITVKIPVDKIGEV
IGPKGKMINQIQEDTGAEITIEDDGTIYIGASDGPAAEAARATINAIANPTMPEVGERYL
GTVVKTTTFGAFVSLMPGKDGLLHISQIRKLAGGKRVENVEDVLAVGTKVQVEIAEIDQR
GKLSLIPVIDGEAAGDDADKDDSDK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacgctagtggagaacgagacccactacgccgaggccgtcattgacaacggc
tccttcggcacccgcaccatccgcttcgagacgggccgcctggcccgccaggccgccggc
tccgccgttgcctacctggacgacgacacgatggtgctttccgccaccaccgcgtcgaag
aagcccaaggaccagctcgacttcttccccctgacggtggacgtcgaggagcgccagtac
gcggccggcaagatccccggctcgttcttccgccgtgagggccgcccctccgaggacgcg
atcctcacctgccgcctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgc
aacgagatccaggtcgtcgcgacggtcatggcgctcaaccccgaccacctgtacgacgtc
gtcgcgatcaacgccgcgtccgcgtccacccagctggccggcctgcccttctccggcccg
atcggcggcgtccgcgtcgcgctgatccgcggccagtgggtggccttcccgacgcacacc
gagcttgaggacgccgtcttcgacatggtcgtcgcgggccgcaccctcgaagacggcgac
gtcgcgatcatgatggtcgaggccgaggccacggagcagaccatcgccctcgtcaagggc
ggcgccgaggcgccgaccgaggagatcgtcgcctccggcctggaggccgcgaagccgttc
atcaaggtcctctgcaaggcccaggccgacctggccgccaaggccgccaagcccgagggc
gagttcccggtcttcctggactaccaggacgacgtgtacgaggccctcgcggccgccgtc
aagggcgacctctcccaggcgctgaccatcgcgggcaagcaggaccgcgaggccgagctg
gaccgcgtcaaggacatcgccgccgagaagctcctcccggccttcgagggccgcgagaag
gagatctccgccgcctaccgcagcctgaccaaggccctggtgcgcgagcgcgtcatcaag
gacaaggtccgcatcgacggccgcgggctcacggacatccgtaccctcgccgccgaggtc
gaggccatcccgcgcgtgcacggctcggcgctgttcgagcgtggcgagacccagatcctg
ggcgtcaccaccctcaacatgctccgcatggagcagcagctggacaccctctccccggtg
acccgcaagcgctacatgcacaactacaacttcccgccgtactccgtcggcgagaccggc
cgcgtcggctccccgaagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgatc
gtgccggtcctgccgacccgcgaggagttcccctacgcgatccgccaggtgtccgaggcc
ctcggctccaacggttcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctg
aacgccggtgtgcccctcaaggcccccgtcgccggtatcgccatgggcctgatctcccag
gagatcgacggcaagacccactacgtcgccctcaccgacatcctcggtgcggaggacgcc
ttcggcgacatggacttcaaggtcgccggcaccaaggagttcgtcaccgccctccagctc
gacaccaagctggacggcatcccggcctccgtcctggccgcggccctcacccaggcccgc
gacgcccgcctccacatcctcgacgtgatgatggaagcgatcgacacgccggacgcgatg
tccccgttcgccccgcggatcatcaccgtcaagatccccgtggacaagatcggtgaggtc
atcggccccaagggcaagatgatcaaccagatccaggaggacaccggcgccgagatcacg
atcgaggacgacggcaccatctacatcggtgcctccgacggcccggccgccgaggccgcc
cgcgccacgatcaacgcgatcgccaacccgaccatgccggaggtcggcgaacgctacctg
ggtacggtcgtcaagaccaccaccttcggtgccttcgtctccctgatgcccggcaaggac
ggcctgctgcacatctcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtc
gaggacgtgctcgcggtcggcaccaaggtgcaggtcgagatcgccgagatcgaccagcgc
ggcaagctctccctgatccccgtgatcgacggcgaggccgccggtgacgacgctgacaag
gacgactccgacaagtga
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