Streptomyces lavendulae subsp. lavendulae: SLAV_11340
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Entry
SLAV_11340 CDS
T05314
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slx
Streptomyces lavendulae subsp. lavendulae
Brite
KEGG Orthology (KO) [BR:
slx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slx03016
]
SLAV_11340 (truB)
Enzymes [BR:
slx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SLAV_11340 (truB)
Transfer RNA biogenesis [BR:
slx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SLAV_11340 (truB)
Prokaryotic type
SLAV_11340 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATZ24132
UniProt:
A0A2K8PBL0
LinkDB
All DBs
Position
complement(2714042..2714950)
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AA seq
302 aa
AA seq
DB search
MSSNAGKTPDGLVIVDKPSGFTSHDVVAKMRGIAKTRRVGHAGTLDPMATGVLVLGVEKA
TKLLGHLALTEKEYLGTIRLGQYTLTDDAEGEITSSADASGVTREAVDAGIAKLTGDIMQ
VPSKVSAIKIKGVRSYKRARDGEDFEIPARPVTISSFQVYDMREAEAEDGTKVVDLVVSV
VCSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDRARTLDQLQEELTVMPIGEAA
AAAFPRWDLDARRASLLANGVRIEMPDEYQDGRTVAVYGPEGQLLGLVESKNGKAKSLAV
FV
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaacgcagggaagactccggacggccttgtcatcgtcgacaagccgtccggc
ttcacttcgcacgacgtggtcgccaagatgcgcgggatcgccaagacccgtcgcgtcggc
cacgccggcaccctcgacccgatggcgacgggcgtcctcgtcctcggcgtggagaaggcc
accaagctcctcggccacctcgcgctgaccgagaaggagtacctcgggaccatccgtctc
gggcagtacaccctcacggacgacgccgagggcgagatcacctcgtcggccgacgcctcc
ggggtgacccgcgaggcggtggacgccggcatcgcgaagctgaccggcgacatcatgcag
gtcccgtccaaggtcagcgccatcaagatcaagggcgtgcgctcctacaagcgcgcccgc
gacggcgaggacttcgagatcccggcccggccggtgaccatctcgtcgttccaggtgtac
gacatgcgggaggcggaggccgaggacggcaccaaggtcgtcgacctcgtcgtctccgtc
gtctgctccagcggtacgtacatccgagccctcgcccgcgacctgggcgccgacctcggc
gtgggcggccacctcacggcgctgcggcgcacgcgggtgggcccgtacaagctcgaccgc
gcgcggacgctggaccagctccaggaggagctgaccgtgatgccgatcggcgaggcggct
gccgccgccttcccgcgctgggacctggacgcccggcgggcctcgctgctcgccaacggg
gtgcggatcgagatgccggacgagtaccaggacggccggacggtcgccgtctacgggccc
gaggggcagctgctcgggctcgtggagagcaagaacggcaaggcgaagtccctcgcggtc
ttcgtctga
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